|
Name : dnaB (EbC_03160) Accession : YP_003739707.1 Strain : Erwinia billingiae Eb661 Genome accession: NC_014306 Putative virulence/resistance : Unknown Product : Replicative DNA helicase Function : - COG functional category : L : Replication, recombination and repair COG ID : COG0305 EC number : - Position : 377817 - 379232 bp Length : 1416 bp Strand : + Note : silverDB:661Eb00409 DNA sequence : ATGGCAGGAAATAAACCCACCAACAAATCCAACGAAAACCGTGAACCGCGCGACCGGCAGATGGAAGGCCTGAAGTTGCC GCCGCATTCTCTGGAAGCGGAACAGTCCGTGTTGGGCGGGTTAATGCTGGATAACGAACGCTGGGATAACGTCTCCGAAC GCGTGGTCGCGCTGGACTTCTTCAGCCGCCCGCACCGGATGATCTTCAGCGAAATGCAGCGCCTGCTGGAACTGGGCAAA CCCATCGATTTGATCACCCTGTCTGAATCGCTGGAAACCAAAAACGAGCTGAATCTGGTTGGCGGATTCGCCTATCTGGC CGAACTGTCGAAAAACACCCCAAGTGCGGCGAACATCGGTGCCTATGCGGATATCGTGCGCGAACGTGCGGTGGTGCGTG AGATGATCTCGGTGGCGAATGAAATTGCCGATGCGGGTTACGATCCGCAGGGACGCACCAGCGAAGATCTGCTCGATCTG GCGGAATCCCGCGTGTTCCAGATCGCCGAAAGCCGGGCCAATAAAGATACCGGCCCGAAGAGTGTCGATCAGATCCTTGA GGCGACGATCGCCAGGATCGAATCGCTGTATCAGACGCCGCACGATGGTGTAACCGGCGTGGATACCGGCTATCAGGATC TGAACAAGAAGACCGCCGGTCTGCAGCGTTCGGATCTGATTATCGTCGCGGCGCGTCCGGCGATGGGTAAAACCACCTTC GCCATGAACCTGTGTGAAAACGCCGCGATGCTGCAGGACAAACCGGTGCTGATTTTCAGTCTGGAGATGCCCGGCGAACA GATCATGATGCGTATGCTGGCGTCACTTTCCCGCGTCGATCAAACCCGTATCCGTACCGGCCAGCTCGATGATGAGGATT GGGCGCGTATCTCCAGCACCATGGGCATTCTGCTGGAGAAAAAGAACATGTTTATCGATGACTCCTCGGGCCTGACGCCG ACGGAAGTCCGCTCCCGTGCCCGCCGCATCTTCCGCGAACACGGCGGCCTGAGCATGATCATGATCGATTACCTTCAGCT GATGCGCGTGCCGTCGCTTTCTGACAACCGTACGTTAGAAATTGCCGAAATCTCCCGTTCCCTTAAGGCGCTGGCGAAAG AGCTTCAGGTGCCGGTGGTGGCGCTGTCGCAGCTTAACCGCTCGCTGGAGCAGCGTGCCGATAAGCGCCCGGTCAACTCC GACCTGCGTGAATCAGGCTCCATCGAGCAGGATGCCGACTTAATCATGTTTATCTACCGTGATGAGGTCTACCACGAAAA CAGCGATCAGAAAGGCATTGCGGAAATCATTCTGGGTAAACAGCGTAACGGCCCGATCGGCACGGTGCGCCTGACCTTCA ACGGTCAGTGGTCGCGTTTTGATAACTACGCTGGCCCGCAATACGACGACGAATAA Protein sequence : MAGNKPTNKSNENREPRDRQMEGLKLPPHSLEAEQSVLGGLMLDNERWDNVSERVVALDFFSRPHRMIFSEMQRLLELGK PIDLITLSESLETKNELNLVGGFAYLAELSKNTPSAANIGAYADIVRERAVVREMISVANEIADAGYDPQGRTSEDLLDL AESRVFQIAESRANKDTGPKSVDQILEATIARIESLYQTPHDGVTGVDTGYQDLNKKTAGLQRSDLIIVAARPAMGKTTF AMNLCENAAMLQDKPVLIFSLEMPGEQIMMRMLASLSRVDQTRIRTGQLDDEDWARISSTMGILLEKKNMFIDDSSGLTP TEVRSRARRIFREHGGLSMIMIDYLQLMRVPSLSDNRTLEIAEISRSLKALAKELQVPVVALSQLNRSLEQRADKRPVNS DLRESGSIEQDADLIMFIYRDEVYHENSDQKGIAEIILGKQRNGPIGTVRLTFNGQWSRFDNYAGPQYDDE |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| PMI2640 | YP_002152342.1 | DNA helicase | Not tested | Not named | Protein | 2e-99 | 53 |
| dnaB2 | YP_001402701.1 | replicative DNA helicase | Not tested | YAPI | Protein | 2e-105 | 53 |
| api2 | CAF28476.1 | putative DNA binding protein with DNA-dependent ATPase activity | Not tested | YAPI | Protein | 8e-106 | 53 |
| dnaB2 | YP_001007676.1 | putative DNA helicase | Not tested | YAPI | Protein | 1e-104 | 52 |
| unnamed | ABR13456.1 | replicative DNA helicase | Not tested | PAGI-5 | Protein | 6e-98 | 49 |
| t4227 | NP_807829.1 | DNA helicase | Not tested | SPI-7 | Protein | 4e-91 | 49 |
| STY4522 | NP_458617.1 | DNA helicase | Not tested | SPI-7 | Protein | 4e-91 | 49 |
| dnaB | CAI36044.1 | replicative DNA helicase DnaB | Not tested | PPHGI-1 | Protein | 1e-84 | 48 |
| dnaB1 | YP_005176258.1 | replicative DNA helicase | Not tested | ICEPmu1 | Protein | 3e-79 | 45 |
