Gene Information

Name : EbC_31530 (EbC_31530)
Accession : YP_003742531.1
Strain : Erwinia billingiae Eb661
Genome accession: NC_014306
Putative virulence/resistance : Unknown
Product : integrase
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG0582
EC number : -
Position : 3531569 - 3532726 bp
Length : 1158 bp
Strand : +
Note : silverDB:661Eb04168

DNA sequence :
ATGCTTACCGTAAAGCAGATCGACGCTGCCAAACCAAAAGACAAGCCTTACCGGCTTCTGGACAGTAATGGCCTGTATCT
GTATGTCCCGGTATCGGGGAAGAAGGTGTGGCAGTTGCGGTACAAGATTGAGGGCAAAGAGAAGGTTCTCACTGTCGGAA
AATACCCACTAATGTCTCTGCAGGAAGCACGGGACAAAGCATGGCTTGCACGCAAAGATGTTTCTGGAGGGGTTGACCCA
ATTAAGGCTAAGAAGCAGTTGGCCAGGGTAAACACCTTCGGAGCGATTTACAGGGAATGGTATGAGCATAAAAGGCAGGT
GTGGTCTCTGAAGTACGCGGAAGAGCTTGGAAGGATGTTCGCAGATGATGTGTTGCCAATGATTGGCGACATGGAGATAA
GCGAGATTGAGCCGATGCAGATCCTGTCTGTTATCCGGCTGTATGAGGAAAGAGGGGCGATGGAGCGTGCCAATAAGGCC
CGCCGCCGCTGTGGTGAGGTTTTCCGTTATGCGATCATAACTGGCAGGGCAAAATACAATCCAGCACCAGACCTTGCTGA
TGCGATGAAGGGTTACCGCAAAAAGAACTACCCTTTCCTGCCTTCCGACCAGATACCGGCTTTCAACCAGGCTCTTGCAG
GCTATTCGGGTAGCGTTGTATCCCGGGTGGCCACACAGTTTCTGCAGTATACTGCCCTGAGAACGATTGAGATGCGGTCG
CTGAAATGGACGGACATCGACCTTGCAACGAAGACCATCACAATCCCTCCCGAAGTGATGAAGGGGCGACGGGCCCATAT
CGTCCCATTGTCTGACCAGGTCATCACACTTCTTGAATCACTGCGGCCAATCACACAACCCGTATCCCTGTTTGTGTTTG
CTGGCCGAAATGACAAAAAGAAATCCCTTAGTGATAACGCTGTTCTGCAGGTGATCCGCCAGATTGGCTATGAGGGACTG
GCAAGTGGACATGGATTCCGCCACCAGTTCAGCACCATCATGAATGAGCATGAGTGGCCAAATGACGCCATTGAGAGACA
GCTTTCTCACCATGACAGCGGAACCATTCGGGGCATCTACAACCATGCTCAATACCTGGAGAAACGCCGGGAGATGATGC
AATGGTGGGCCGACTGGATAGACGGAAAGGTTAGCTAA

Protein sequence :
MLTVKQIDAAKPKDKPYRLLDSNGLYLYVPVSGKKVWQLRYKIEGKEKVLTVGKYPLMSLQEARDKAWLARKDVSGGVDP
IKAKKQLARVNTFGAIYREWYEHKRQVWSLKYAEELGRMFADDVLPMIGDMEISEIEPMQILSVIRLYEERGAMERANKA
RRRCGEVFRYAIITGRAKYNPAPDLADAMKGYRKKNYPFLPSDQIPAFNQALAGYSGSVVSRVATQFLQYTALRTIEMRS
LKWTDIDLATKTITIPPEVMKGRRAHIVPLSDQVITLLESLRPITQPVSLFVFAGRNDKKKSLSDNAVLQVIRQIGYEGL
ASGHGFRHQFSTIMNEHEWPNDAIERQLSHHDSGTIRGIYNHAQYLEKRREMMQWWADWIDGKVS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
int CAC39282.1 integrase Not tested LPA Protein 7e-92 51
aec33 AAW51716.1 Int Not tested AGI-3 Protein 6e-92 51
int AAD54663.1 Sai integrase Not tested SHI-2 Protein 4e-91 51
S4835 NP_839238.1 integrase Not tested SHI-2 Protein 6e-91 51
SF3698 NP_709437.1 integrase Not tested SHI-2 Protein 6e-91 51
intL NP_290239.1 integrase for prophage 933L and the LEE pathogenicity island Not tested LEE Protein 7e-91 50
ECs4534 NP_312561.1 integrase Not tested LEE Protein 7e-91 50
int AAC31482.1 CP4-like integrase Not tested LEE Protein 5e-91 50
int ACU09430.1 integrase Not tested LEE Protein 5e-91 50
int AAD44730.1 Int Not tested SHI-2 Protein 2e-90 50
ESA_03025 YP_001439090.1 hypothetical protein Not tested Not named Protein 2e-84 48
unnamed AFX83955.1 integrase Not tested SE-PAI Protein 5e-79 45

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
EbC_31530 YP_003742531.1 integrase VFG0598 Protein 3e-91 51
EbC_31530 YP_003742531.1 integrase VFG0783 Protein 3e-91 50