Gene Information

Name : EbC_30140 (EbC_30140)
Accession : YP_003742392.1
Strain : Erwinia billingiae Eb661
Genome accession: NC_014306
Putative virulence/resistance : Unknown
Product : ABC transporter ATP-binding protein
Function : -
COG functional category : R : General function prediction only
COG ID : COG4172
EC number : -
Position : 3365632 - 3367215 bp
Length : 1584 bp
Strand : +
Note : silverDB:661Eb03989

DNA sequence :
ATGACGCTGCTGACCGTTAAAAATTTAAGCATTGCCTTCCGCCAGGCGGGCGTTGACCGCCAGGTGGTCAGTGACCTGTC
GCTGTCGGTGGATGCTGGCGAAACGCTGGCGCTGGTCGGCGAGTCGGGGTCCGGCAAAAGCGTGACCGCACTGTCAATGA
TGCGTCTGTTGCCCACGCCGCCGGTAATTTACCCGCAGGGGGAAATCCTGTTTAACGGCCAGGATGTGCTGAAGGCCGAT
GAACGCACCTTGCGCGGGCTGCGTGGCAACCGCATGGCAATGATATTTCAGGAACCGATGATCTCGCTGAACCCGCTGCA
CAGCATTGAGAAACAGCTGTACGAAGTGCTGTCGCTGCATCGCGGGATGCGTAAAGAGGCGGCGCGCGCGGAGATGCTGA
GCTGTCTCGATCGGGTTGGCATCCGCCAGGCGGCGAAACGGCTGAATGATTTTCCGCACCAGCTTTCCGGCGGCGAGCGT
CAGCGCGTGATGATCGCCATGGCGCTGTTGACGCAGCCACAGCTGTTGATTGCCGATGAACCGACCACCGCGCTGGATGT
GACCGTGCAGGCGCAAATCCTGACGCTGCTGCGCGAGTTAAAGCAGGAGCTGAATATGGGCCTGCTGTTTATTACCCATA
ATCTGCGGATTGTCCGGCAGCTGGCAGACAATGTGGTGGTGATGCGCAACGGCCAGGCGGTGGAAACCAATAGCACCACA
CAACTGTTCAGTGCGCCGCAACATGCCTATACCCAGGCGCTGCTGAACGCCGAACCGGAAGGTCGACCGGAGCCGGCAGA
CGTCGATGCTGAGCCCTTGCTGCGGGTTAAAAATTTGCGGGTGGCCTTTCCGATCAAACAGGGCTTTTTACGGCGCATCA
CCGGCTACCATCATGCATTGAAGTCGTTAAGCTTTACCCTGCGGCCCGGCGAGAGTCTTGGGCTGGTAGGCGAGTCTGGC
TCCGGTAAAAGCACCACCGGGCTGGCGCTACTCCGCCTGATCCAGTCCGAAGGTGAGATCTGGTTTAACGATCGGCCGCT
TCATCAGTGGGATCGTCGTCAGATGCTGCCGGTTCGTCGTCAGGTGCAGGTGGTTTTCCAGGATCCCAACTCGTCGCTGA
ATCCGCGCCTTGACGTGCTGCAGATTATTGCCGAAGGCTTGCAGGTGCATCATCCCGATCTGAACGCGGCCCAGCGCGAA
GCTAGAGTGATTGCGGCGATGGAGGAAGTGGGGCTGGATGCGGAAACGCGCCACCGCTATCCGGCAGAATTCTCCGGTGG
CCAGCGCCAGCGCATTGCGATTGCCCGCGCGCTGATCCTTGAACCGCAGCTGATCATTCTGGATGAACCGACCTCTTCCC
TCGATCGCTCGGTGCAGAAGCAGATTCTGGCCCTGTTGAAAAAACTGCAAAACACCCACCGGCTGGCGTATATCTTTATC
AGCCACGATTTACAGGTGGTGCGCTCGCTCTGTCATCAGGTGGTGGTGTTGCGGGAAGGAGAAGTGGTTGAACAGGGAGA
GTGCGAACAGCTGTTCGCTGCCCCGAAAGCCGACTATACCCGCCAGCTGCTGTCACTGGCCTGA

Protein sequence :
MTLLTVKNLSIAFRQAGVDRQVVSDLSLSVDAGETLALVGESGSGKSVTALSMMRLLPTPPVIYPQGEILFNGQDVLKAD
ERTLRGLRGNRMAMIFQEPMISLNPLHSIEKQLYEVLSLHRGMRKEAARAEMLSCLDRVGIRQAAKRLNDFPHQLSGGER
QRVMIAMALLTQPQLLIADEPTTALDVTVQAQILTLLRELKQELNMGLLFITHNLRIVRQLADNVVVMRNGQAVETNSTT
QLFSAPQHAYTQALLNAEPEGRPEPADVDAEPLLRVKNLRVAFPIKQGFLRRITGYHHALKSLSFTLRPGESLGLVGESG
SGKSTTGLALLRLIQSEGEIWFNDRPLHQWDRRQMLPVRRQVQVVFQDPNSSLNPRLDVLQIIAEGLQVHHPDLNAAQRE
ARVIAAMEEVGLDAETRHRYPAEFSGGQRQRIAIARALILEPQLIILDEPTSSLDRSVQKQILALLKKLQNTHRLAYIFI
SHDLQVVRSLCHQVVVLREGEVVEQGECEQLFAAPKADYTRQLLSLA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
oppDF2 YP_005686002.1 Oligopeptide transport ATP-binding protein OppD Not tested PiCp 6 Protein 2e-74 41
oppDF2 YP_005681814.1 Oligopeptide transport ATP-binding protein OppD Not tested PiCp 6 Protein 2e-74 41
oppDF2 YP_005683914.1 Oligopeptide transport ATP-binding protein OppD Not tested PiCp 6 Protein 2e-74 41
cpfrc_01561 YP_003783961.1 hypothetical protein Not tested PiCp 6 Protein 2e-74 41