|
Name : fliP (EbC_26660) Accession : YP_003742044.1 Strain : Erwinia billingiae Eb661 Genome accession: NC_014306 Putative virulence/resistance : Virulence Product : flagellar biosynthesis protein Function : - COG functional category : N : Cell motility COG ID : COG1338 EC number : - Position : 2996881 - 2997615 bp Length : 735 bp Strand : + Note : silverDB:661Eb03541 DNA sequence : ATGAAACGCTTTCTTCCTCTGCTGGCGCTGTTTTTACTGATCGCGCCTGATGTGCACGCGCAGCTGCCTGGCCTGATGAG CCACCCAACCGCCAACGGCGGCCAGAGTTGGTCATTACCGGTACAGACGCTGGTCTTCATCACCTCGCTGACCTTCCTGC CCGCCATCCTGCTGATGATGACCAGCTTCACCCGCATCATTATCGTGTTTGGCCTGCTGCGTAACGCACTGGGCACGCCG TCCGCACCGCCGAACCAGGTGCTGCTCGGTCTGGCGCTGTTCCTGACCTTCTTTATTATGGGTCCAGTGTTCGACAAAAT TTACCAGGATGCTTATCTGCCGTTCAGTCAGGACAAGATCAGCATGCAGGATGCGATTGATAAAGGGGCACAGCCGCTGC GTGAGTTTATGCTGCGCCAGACCCGTGAAGCCGACCTTGCGCTGTTTGCCCGTCTCTCCAACTCCCCGCCATTGCAGGGA CCGGAAGCCGTGCCGATGCGTATTCTGTTACCCGCCTATGTCACCAGCGAATTGAAAACGGCTTTCCAGATTGGTTTTAC CGTGTTTATCCCGTTTTTGATTATCGACCTGGTGGTTGCCAGCGTACTGATGGCGCTGGGGATGATGATGGTGCCACCGG CCACTATCTCACTGCCCTTTAAGCTGATGCTGTTTGTATTAGTTGACGGCTGGTCGCTGTTGGTCAGCTCGCTGGCGCAA AGTTTTTACAGTTAA Protein sequence : MKRFLPLLALFLLIAPDVHAQLPGLMSHPTANGGQSWSLPVQTLVFITSLTFLPAILLMMTSFTRIIIVFGLLRNALGTP SAPPNQVLLGLALFLTFFIMGPVFDKIYQDAYLPFSQDKISMQDAIDKGAQPLREFMLRQTREADLALFARLSNSPPLQG PEAVPMRILLPAYVTSELKTAFQIGFTVFIPFLIIDLVVASVLMALGMMMVPPATISLPFKLMLFVLVDGWSLLVSSLAQ SFYS |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| hrcR | AAT96343.1 | HrcR | Virulence | S-PAI | Protein | 3e-27 | 44 |
| hrcR | AAT96262.1 | HrcR | Virulence | S-PAI | Protein | 3e-27 | 44 |
| hrcR | AAT96303.1 | HrcR | Virulence | S-PAI | Protein | 3e-27 | 44 |
| hrcR | ABA47279.1 | HrcR | Virulence | S-PAI | Protein | 1e-28 | 43 |
| YPO0270 | YP_002345352.1 | type III secretion system protein | Virulence | Not named | Protein | 8e-31 | 43 |
| hrcR | ABQ88359.1 | HrcR | Virulence | Hrp PAI | Protein | 5e-21 | 41 |
| hrpW | AAB05075.1 | HrpW | Virulence | Hrp PAI | Protein | 5e-21 | 41 |
| hrcR | AAT96146.1 | HrcR | Virulence | T-PAI | Protein | 9e-22 | 41 |
| hrcR | AAT96200.1 | HrcR | Virulence | T-PAI | Protein | 8e-22 | 41 |
| ssaR | NP_460384.1 | type III secretion system protein | Virulence | SPI-2 | Protein | 4e-30 | 41 |
| ssaR | CAA68199.1 | secretion system apparatus, SsaR | Virulence | SPI-2 | Protein | 3e-30 | 41 |
| ssaR | YP_216427.1 | type III secretion system protein | Virulence | SPI-2 | Protein | 4e-30 | 41 |
| lscR | AAO18040.1 | LscR | Virulence | TTSS locus | Protein | 2e-31 | 41 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| fliP | YP_003742044.1 | flagellar biosynthesis protein | VFG2338 | Protein | 7e-94 | 89 |
| fliP | YP_003742044.1 | flagellar biosynthesis protein | VFG2494 | Protein | 9e-75 | 68 |
| fliP | YP_003742044.1 | flagellar biosynthesis protein | VFG1259 | Protein | 2e-64 | 59 |
| fliP | YP_003742044.1 | flagellar biosynthesis protein | VFG2016 | Protein | 2e-60 | 55 |
| fliP | YP_003742044.1 | flagellar biosynthesis protein | VFG0188 | Protein | 2e-32 | 42 |
| fliP | YP_003742044.1 | flagellar biosynthesis protein | VFG0519 | Protein | 2e-30 | 41 |
| fliP | YP_003742044.1 | flagellar biosynthesis protein | VFG0044 | Protein | 8e-32 | 41 |
| fliP | YP_003742044.1 | flagellar biosynthesis protein | VFG0394 | Protein | 2e-32 | 41 |
