Gene Information

Name : fliP (EbC_26660)
Accession : YP_003742044.1
Strain : Erwinia billingiae Eb661
Genome accession: NC_014306
Putative virulence/resistance : Virulence
Product : flagellar biosynthesis protein
Function : -
COG functional category : N : Cell motility
COG ID : COG1338
EC number : -
Position : 2996881 - 2997615 bp
Length : 735 bp
Strand : +
Note : silverDB:661Eb03541

DNA sequence :
ATGAAACGCTTTCTTCCTCTGCTGGCGCTGTTTTTACTGATCGCGCCTGATGTGCACGCGCAGCTGCCTGGCCTGATGAG
CCACCCAACCGCCAACGGCGGCCAGAGTTGGTCATTACCGGTACAGACGCTGGTCTTCATCACCTCGCTGACCTTCCTGC
CCGCCATCCTGCTGATGATGACCAGCTTCACCCGCATCATTATCGTGTTTGGCCTGCTGCGTAACGCACTGGGCACGCCG
TCCGCACCGCCGAACCAGGTGCTGCTCGGTCTGGCGCTGTTCCTGACCTTCTTTATTATGGGTCCAGTGTTCGACAAAAT
TTACCAGGATGCTTATCTGCCGTTCAGTCAGGACAAGATCAGCATGCAGGATGCGATTGATAAAGGGGCACAGCCGCTGC
GTGAGTTTATGCTGCGCCAGACCCGTGAAGCCGACCTTGCGCTGTTTGCCCGTCTCTCCAACTCCCCGCCATTGCAGGGA
CCGGAAGCCGTGCCGATGCGTATTCTGTTACCCGCCTATGTCACCAGCGAATTGAAAACGGCTTTCCAGATTGGTTTTAC
CGTGTTTATCCCGTTTTTGATTATCGACCTGGTGGTTGCCAGCGTACTGATGGCGCTGGGGATGATGATGGTGCCACCGG
CCACTATCTCACTGCCCTTTAAGCTGATGCTGTTTGTATTAGTTGACGGCTGGTCGCTGTTGGTCAGCTCGCTGGCGCAA
AGTTTTTACAGTTAA

Protein sequence :
MKRFLPLLALFLLIAPDVHAQLPGLMSHPTANGGQSWSLPVQTLVFITSLTFLPAILLMMTSFTRIIIVFGLLRNALGTP
SAPPNQVLLGLALFLTFFIMGPVFDKIYQDAYLPFSQDKISMQDAIDKGAQPLREFMLRQTREADLALFARLSNSPPLQG
PEAVPMRILLPAYVTSELKTAFQIGFTVFIPFLIIDLVVASVLMALGMMMVPPATISLPFKLMLFVLVDGWSLLVSSLAQ
SFYS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
hrcR AAT96262.1 HrcR Virulence S-PAI Protein 3e-27 44
hrcR AAT96303.1 HrcR Virulence S-PAI Protein 3e-27 44
hrcR AAT96343.1 HrcR Virulence S-PAI Protein 3e-27 44
hrcR ABA47279.1 HrcR Virulence S-PAI Protein 1e-28 43
YPO0270 YP_002345352.1 type III secretion system protein Virulence Not named Protein 8e-31 43
hrcR ABQ88359.1 HrcR Virulence Hrp PAI Protein 5e-21 41
hrpW AAB05075.1 HrpW Virulence Hrp PAI Protein 5e-21 41
hrcR AAT96146.1 HrcR Virulence T-PAI Protein 9e-22 41
hrcR AAT96200.1 HrcR Virulence T-PAI Protein 8e-22 41
ssaR CAA68199.1 secretion system apparatus, SsaR Virulence SPI-2 Protein 3e-30 41
ssaR YP_216427.1 type III secretion system protein Virulence SPI-2 Protein 4e-30 41
ssaR NP_460384.1 type III secretion system protein Virulence SPI-2 Protein 4e-30 41
lscR AAO18040.1 LscR Virulence TTSS locus Protein 2e-31 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
fliP YP_003742044.1 flagellar biosynthesis protein VFG2338 Protein 7e-94 89
fliP YP_003742044.1 flagellar biosynthesis protein VFG2494 Protein 9e-75 68
fliP YP_003742044.1 flagellar biosynthesis protein VFG1259 Protein 2e-64 59
fliP YP_003742044.1 flagellar biosynthesis protein VFG2016 Protein 2e-60 55
fliP YP_003742044.1 flagellar biosynthesis protein VFG0188 Protein 2e-32 42
fliP YP_003742044.1 flagellar biosynthesis protein VFG0519 Protein 2e-30 41
fliP YP_003742044.1 flagellar biosynthesis protein VFG0044 Protein 8e-32 41
fliP YP_003742044.1 flagellar biosynthesis protein VFG0394 Protein 2e-32 41