Gene Information

Name : tpx (EbC_23000)
Accession : YP_003741678.1
Strain : Erwinia billingiae Eb661
Genome accession: NC_014306
Putative virulence/resistance : Virulence
Product : Thiol peroxidase
Function : -
COG functional category : O : Posttranslational modification, protein turnover, chaperones
COG ID : COG2077
EC number : -
Position : 2605901 - 2606404 bp
Length : 504 bp
Strand : +
Note : silverDB:661Eb03090

DNA sequence : 
ATGTCTCAGACAGTTCATTTTCAAGGCAACCCGGTTGCCGTTGCAGGTCAGATCCCCGAGAAGGGCGAAGCCGCTAAGCC
ATTTACACTGGTCGCTAAAGACCTGTCGGAAGTCTCGCTGACTCAGTATGCCGGCAAGCGTAAAGTGCTTAACATCTTCC
CAAGCGTCGATACCGGCGTGTGTGCCACTTCCGTACGCAAATTTAACCAGCTGGCAGGTGAAGTGAGCAACACGGTCGTG
CTGTGTATTTCTGCCGACTTACCTTTTGCTCAGTCCCGCTTCTGCGGCTCTGAAGGCTTAAGCAACGTGGTCACCCTTTC
CACGCTGCGTGGCAGTGATTTCAAACAGGATTATGGTGTGGCGATTGCTGATGGCCCGTTGAAAGGTCTGGCGGCGCGCG
CAGTGGTGATTCTGGATGAGCAGGACAAGGTGATTTACAGCCAGTTGGTTAACGAGATCACCACTGAGCCGGAGTATGAT
GCGGCGCTGGCTGCTTTAAAGTAA

Protein sequence : 
MSQTVHFQGNPVAVAGQIPEKGEAAKPFTLVAKDLSEVSLTQYAGKRKVLNIFPSVDTGVCATSVRKFNQLAGEVSNTVV
LCISADLPFAQSRFCGSEGLSNVVTLSTLRGSDFKQDYGVAIADGPLKGLAARAVVILDEQDKVIYSQLVNEITTEPEYD
AALAALK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
tpx NP_230472.1 thiol peroxidase Virulence VPI-1 Protein 1e-34 47
tpx YP_001216305.1 thiol peroxidase Not tested VPI-1 Protein 1e-34 47
tagD AAK20751.1 toxR-activated gene D protein Virulence VPI Protein 9e-35 47
tagD AAK20781.1 toxR-activated gene D protein Virulence VPI Protein 9e-35 47

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
tpx YP_003741678.1 Thiol peroxidase VFG0087 Protein 4e-35 47