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Name : EbC_18170 (EbC_18170) Accession : YP_003741198.1 Strain : Erwinia billingiae Eb661 Genome accession: NC_014306 Putative virulence/resistance : Virulence Product : fimbrial usher protein Function : - COG functional category : N : Cell motility COG ID : COG3188 EC number : - Position : 2060497 - 2063031 bp Length : 2535 bp Strand : - Note : silverDB:661Eb02453 DNA sequence : ATGGAAAAATTCAGCGTTGAAAAACATTCCAGCACGGCGATCGCCTCCCGGGCGATGCCGCCGCAACAGCGTTTCCTCTC TTCCCTGCTGGTTTGCGGATTAGGCATCACCTCACCGATGGCGCAGGCGGAAGACTATTTCAATCCGGCGGCACTGGAGA TGACCAGTGAGCCGTCGGCTATCGATCTGGAAAAATTTTCGGTCAGCGGCGGTCAGATGCCCGGATCCTATCACGTCGAT ATTTATCTTAACGACAGCCGGATTGACACCCGTGACGTCAACTTTGTCGATGTTAACGGCAAGCTGCAGCCGGAATTCAC CCCAACCGAGCTGCGGGCGATGGGAGTCAAACTTGACGCTTTCCCTGCGCTGCAACTGTTGGACGTCGATAAGCCGCTCA CCGGGCTGGAGGGGTATATTCCGCATGCCGCCAGCCAGTTTGATTTCAACCAGCAGCGCCTTAACCTGAGCATTCCTCAG GCGGCGCTGACCAGCGAAGCGCGGGGCTATGTCGACCCGTCGCAGTGGGACCAGGGGATGCCCGCCGCGCTGTTGAACTA TACCTTTAGTGGCGCCAGCACCCGCGTCGATCGCCGTTCAGATCGGCAAGACAACTATTACCTTAACCTGCGCAGCGGCG TGAATCTGGGCGCATGGCGTTTGCGTAATTATTCCACCCTGAATAACGGCAACGCTCAAAACGTTAACACCTTCTTGCAG CGCGATGTGCAGCCGCTGCAAGCGCAGCTGACGCTGGGTGACAGCGCGTCCCCTGGTGAAGTGTTTGACAGCGTGCAGTT TCGCGGTGCGCAACTGGCGTCAGATGACAATATGATCCCCGACAGCCTGAAAGGCTTTGCGCCGGTGGTACGCGGGATTG CGCAAAGCAACGCTCAGGTTACCGTGCGTCAGAATGGCTATATCATTTATCAGACTTACGTGCCGCCCGGCGCCTTCGCC ATCACCGACCTTTACCCTACTTCCTCCAGCGGCGATCTGGCTATCACCATTACCGAAGCCGACGGTACGGAACGCCATCT GGTGCAGCCATTTTCAGCAGTGCCGGTGATGCTGCGCGAAGGTCGAATGAAGTATGCCGCTACCGCCGGTGAATATCGTT CCAGTAATACGCAAGCCAGCACGCCGACCTTTGCTCAGGGCACGTTGATCTATGGCCTGCCGGCGAACACCACGGTATAC GGCGGTCTGTTGGTCTCTGAACGCTATAACGCGCAGGTAATGGGGGTTGGACATGGCTTTGGCACACTCGGCTCAATCTC GCTGGATGTCACTCAGGCCAGCACCGAACTGCGCGATGGCAGCCGTCATCGCGGGCAGTCATATCGTTTCCAGTACGCGA AAGATATTGAAGCGACCAACACCACCTTCACTCTGGCGGGCTATCGCTACTCCACCCTCGGCTTTTATGACTTTCGCGAT GCCAACGAGTTGGGCACCTTTGACCCTAACGCCTGGCAGCAAAACAGCAACAAGCGCAGCAAGGCGCAGGTGAATATCAA TCAGTCGCTGAAAAGCTTCGGCAACCTTTACCTGTCGGCCTGGCAGCAGGACTACTGGCAGCAGAGCGGTTATGAGCGCA ATGTCAGTGCCGGCTACAACCTGAGCTACAACAGCATCACCTATGGGCTGAGCTACACCTACAGCCAGGCACCAGGCAAT AATGCCAATGACCAGCAGTTTGCCTTCAACGTGCAGATCCCGCTCGGCAAATGGCTGAGCAACAGCTGGGCCAGTTACAA TATCAATAGCAGTCGGCGTGGCAGTACAAACCACCAGGTCGGCGTCAGCGGCACCGCGCTGGCCGACAACAACCTCAGCT ATAACCTGCAGCAGAGCTTCGGTAATCGCGGCCAGGGTGCGAGCAGCAATGCCAATGCCAGTTACAAAGGCACCTACGGC GAAATGCAGGGTGGCTTCAACACCTCAGGGGATGCGCAGCAGATTAACTACGGTCTGCAGGGGGGGATAGTGGTTCACCC TTATGGCGTGACGTTCTCTCAGCAACAGGGCGAAACCCTGGCGCTGGTGCGGGCGCCGGGGGCCAGCAACGTAAAAGTGC AGAATAATAGCGGCGTCAGAACCGACTGGCGCGGTTATGCCGTGGTGCCGTATGTCAGCACCTATCGCCAGAACCGCATT GTGCTTGACACCGAAACGCTGGCGGAAGATGTCGATATTGACGGCAGCATCCAGACGGTCACCCCAACCCGCGGTGCCGT GGTACTGGCCGATTTCAACACCCGCGTCGGTAAGCGCGTATTACTCACCCTCAGCTACCTGGGCAAACCGGTGCCGTTTG GCGCTATCGCCACCCTTCGCCAGCCCAAAGGCGCGCTGGAAAACAGCGGCATTATCGGCACCGATGGTCAGCTCTACCTG AGCGGCGTGCCTGATAAAGGCGAGCTGCAGGTGCAATGGGGCAACGCATCCAACCAGCAATGCCAGCTTAACTTTACTCT GCCAGCCACTGAAGGCGCCGCCTCAGTCCTGACCTTAACCGCTGCCTGCCGCTAA Protein sequence : MEKFSVEKHSSTAIASRAMPPQQRFLSSLLVCGLGITSPMAQAEDYFNPAALEMTSEPSAIDLEKFSVSGGQMPGSYHVD IYLNDSRIDTRDVNFVDVNGKLQPEFTPTELRAMGVKLDAFPALQLLDVDKPLTGLEGYIPHAASQFDFNQQRLNLSIPQ AALTSEARGYVDPSQWDQGMPAALLNYTFSGASTRVDRRSDRQDNYYLNLRSGVNLGAWRLRNYSTLNNGNAQNVNTFLQ RDVQPLQAQLTLGDSASPGEVFDSVQFRGAQLASDDNMIPDSLKGFAPVVRGIAQSNAQVTVRQNGYIIYQTYVPPGAFA ITDLYPTSSSGDLAITITEADGTERHLVQPFSAVPVMLREGRMKYAATAGEYRSSNTQASTPTFAQGTLIYGLPANTTVY GGLLVSERYNAQVMGVGHGFGTLGSISLDVTQASTELRDGSRHRGQSYRFQYAKDIEATNTTFTLAGYRYSTLGFYDFRD ANELGTFDPNAWQQNSNKRSKAQVNINQSLKSFGNLYLSAWQQDYWQQSGYERNVSAGYNLSYNSITYGLSYTYSQAPGN NANDQQFAFNVQIPLGKWLSNSWASYNINSSRRGSTNHQVGVSGTALADNNLSYNLQQSFGNRGQGASSNANASYKGTYG EMQGGFNTSGDAQQINYGLQGGIVVHPYGVTFSQQQGETLALVRAPGASNVKVQNNSGVRTDWRGYAVVPYVSTYRQNRI VLDTETLAEDVDIDGSIQTVTPTRGAVVLADFNTRVGKRVLLTLSYLGKPVPFGAIATLRQPKGALENSGIIGTDGQLYL SGVPDKGELQVQWGNASNQQCQLNFTLPATEGAASVLTLTAACR |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| fim2D | AFH78429.1 | putative fimbrial usher protein | Virulence | KpGI-5 | Protein | 3e-162 | 45 |
| sfaF | CAC16953.2 | SfaF protein | Virulence | PAI III 536 | Protein | 4e-168 | 44 |
| phfD | AAO17172.1 | PhfD | Virulence | tcd island | Protein | 2e-166 | 41 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| EbC_18170 | YP_003741198.1 | fimbrial usher protein | VFG0454 | Protein | 1e-180 | 45 |
| EbC_18170 | YP_003741198.1 | fimbrial usher protein | VFG1645 | Protein | 2e-168 | 44 |
| EbC_18170 | YP_003741198.1 | fimbrial usher protein | VFG0912 | Protein | 6e-169 | 44 |
| EbC_18170 | YP_003741198.1 | fimbrial usher protein | VFG0446 | Protein | 2e-160 | 43 |
| EbC_18170 | YP_003741198.1 | fimbrial usher protein | VFG0876 | Protein | 2e-172 | 43 |
