Gene Information

Name : EbC_12830 (EbC_12830)
Accession : YP_003740665.1
Strain : Erwinia billingiae Eb661
Genome accession: NC_014306
Putative virulence/resistance : Virulence
Product : pathogenicity island protein
Function : -
COG functional category : S : Function unknown
COG ID : COG3272
EC number : -
Position : 1457156 - 1458112 bp
Length : 957 bp
Strand : +
Note : silverDB:661Eb01732

DNA sequence : 
ATGAGCGAAAAAATTCCCGTCGGCATCAGCGCCTGTTTGCTCGGTGACAACGTCCGTTTTGATGGCGGTCATAAGCGCTG
CGCTTTCGCCACCGAAGATCTCGCCCCGTTTATCCGTTATGAACCGGCCTGCCCGGAAATGGCGATCGGATTGCCGACGC
CACGACCTGCGCTGCGTTTAACCGAAAATGGTGACGATCTGCCCGCGCTCTGCTTCAGTAATGGCAAAGGCGATCCGGTC
ACCGAGGCCATGCAGTCTTACGCAGAAAAACGCGTTTCCGCCCTGCATCATCTGTGTGGCTACATTGTCTGTGCTAAATC
GCCCAGCTGCGGCATGGAACGCGTGCGGGTCTATCAGGCCGATAACAACAATAACCGCAAAGAAGGGGTAGGGGTCTTTA
CTCGCGAGCTGATGGCGCAAATGCCGTGGCTGCCGGTTGAAGAAGATGGTCGCCTGCACGATCCCGTACTGCGGGAAAAC
TTTGTTGAACGCGTGTATACGCTGCATGAATTTAATGAGCTGTGGCGCAGCGGCCTGACGCGCGGCAAATTAATGGCCTT
TCACAGCCGTTATAAGCTCTCTTTGCTGGCGCACTCCCAGCCGGAATACCGCGAAATGGGGCGTTTTGTTGCGGCGATGG
CCGACTGGTCGTCACTGGAAGAGTATGCCTTTGAGTATCGCCAGCGTCTGATGGATTTGCTGAAGAATCAGGCCACCCGG
GGAAATCACACCAACGTGCTGATGCACGTTCAGGGTTATTTCCGTCCTCAGCTGACCTCAAAACAGCGCCAGGAGCTGAC
CTCGCTGATTGAACACTATCGTCAGGGGATGCAGCCGTTGCTGGCACCGATCACCCTGTTGAAGCATTACATGGCGGAGT
ACCCCGATGCGTATCTGGCGCAGCAGCGCTATTTTGAACCCTATCCGGAAGCGCTTCGCCTGCGCTATGGACACTAG

Protein sequence : 
MSEKIPVGISACLLGDNVRFDGGHKRCAFATEDLAPFIRYEPACPEMAIGLPTPRPALRLTENGDDLPALCFSNGKGDPV
TEAMQSYAEKRVSALHHLCGYIVCAKSPSCGMERVRVYQADNNNNRKEGVGVFTRELMAQMPWLPVEEDGRLHDPVLREN
FVERVYTLHEFNELWRSGLTRGKLMAFHSRYKLSLLAHSQPEYREMGRFVAAMADWSSLEEYAFEYRQRLMDLLKNQATR
GNHTNVLMHVQGYFRPQLTSKQRQELTSLIEHYRQGMQPLLAPITLLKHYMAEYPDAYLAQQRYFEPYPEALRLRYGH

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
STY1731 NP_456139.1 putative pathogenicity island protein Not tested SPI-2 Protein 2e-93 57
t1257 NP_805060.1 pathogenicity island protein Not tested SPI-2 Protein 2e-93 57
orf319 NP_460354.1 inner membrane protein Not tested SPI-2 Protein 2e-93 57
ORF 319 CAB37410.1 - Not tested SPI-2 Protein 1e-93 57
SC1410 YP_216397.1 inner membrane protein Not tested SPI-2 Protein 2e-93 57

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
EbC_12830 YP_003740665.1 pathogenicity island protein VFG0490 Protein 8e-94 57