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Name : EbC_11330 (EbC_11330) Accession : YP_003740517.1 Strain : Erwinia billingiae Eb661 Genome accession: NC_014306 Putative virulence/resistance : Virulence Product : outer membrane usher protein, fimbrial-like Function : - COG functional category : N : Cell motility COG ID : COG3188 EC number : - Position : 1298316 - 1300928 bp Length : 2613 bp Strand : + Note : silverDB:661Eb01519 DNA sequence : ATGCAAATATCACATAATAAAAAAACAGTCAGCACCCTGAATTCTCCAGTTCGTCTTCCGATGTCCATCATGACATTACT GATGGGAGCCGCTTTGTTTCCATCATCAGGGCATGCTGAGCTCTATTTTGCCCCTGAACTGATCTCTTCCGATCCGGCGA TGGTGGCCGATCTGACGCGTTTGCAAAATGCAGGTAATCAGCTTCCGGGCGCCTATGAAGTGGATATTTACCTTAACGGT ACCCGCGTTAACGAGCGCAGCCTGATGTTTATTGATGCGCCAGACGCCAGGAACAAAAGAGAAGTGCGTGATAGCACCGG GCTAATGGCTTGTCTGAATCGCAGTGAACTGGAAGAGCTTGGCGTAGACGTTCGGCAAATTCCGGCCGACGTTGGCGACA CCTGTATTTCTCCGGGAGAATTTATACCCGGCGCCTTTACCTCTTTCGATTTTCAGCGCCAGCGACTGGAGATCAGCGTA CCGCAAGCCGCGTTGCGTACCCGCGCCCAAGGATATATTTCGCCGGAACGCTGGGACGAAGGTATTAATGCGGCAATGAT GAATTACAGCTTCAGCGGCAGTAACAACCGCGGGCGCTATGGTGACAGCCGCAACACCTATCTGAATCTTAAGGGCGGCA TCAACGTGGGGCCATGGCGTTTGCGCGACTACCGCACGTGGAATGAGTACAGCAGTGACCGCTATAACTACCGCAAGTGG CAGCACGTCTATACCTATGCCCAACGTGCCATCATTCCCTTGCGCAGCAACCTGATGCTGGGGGACGGCACGTCGGATGG CGATATCTTTGATTCTCTCGCCTTCAGAGGTGTGCAAATTGCCACGGATGACAGCATGTATCCGGATAGTATGCGGGGAT TCGCGCCGGTTATCAGAGGGATGGCCAATACTAACGCCCGCGTTAATATCCGGCAGAACGGCTATACGGTGTATCAGACG TTTGTTGCGCCTGGTGCATTTGCCATTGACGACCTTTTCCCGGTCTATTCCAGCGGCGATCTTGAAGTCACCGTGACTGA GGCCGATGGCAGCGTTCGGGTATTTACCGTGCCGTATTCGTCGGTACCCGTTTTGCAGCGCGAAGGGCGGATGAAATACA GCCTGACGGCGGGTCAGTACCGTTCATCAAGCGACAGTTATAACAGCCCAGTGTTTGTGCAGGCCACGCTTATCAGCGGC TTACCGCATAACATGACTGGCTACGGCGGTATGCAGTACGCCGAAAATTATCTGTCGGGCTTATTAGGTCTGGGATTCAA CCTCGGTTATCTGGGGGCGATCTCGGCGGATATTACCCAGGCCAACAGCACGCTGGCCGATGGTAATCAATATCAGGGAC GTTCGTTACGCTTTCTCTATGCGCGCTCCCTTAATACTTTGGGAACCAGTTTCCAGCTAACCGGCTATCGCTATTCGACC GAAGGTTTCCATACGCTGGATGAAACGGCGCTAAAGGGCATGAAAGGCTGGCGATATGAGGCTGACACCGTCGCGGCCGA CGGCAGCTTGGTGAAGCAGCCTTACACCGATTATTACAATCTCTATAACAACAAGCGGGCAAAAATCCAGGCCAGCGTAT CCCAGCGAGCGGGCGATCATGGCTCTTTATTCCTGTCTGGCGTAAGGCAGACATACTGGAACACTGACGGCCATTACGAC TCTCTACAGATGGGGTTTAACGGGGCGATGGGGCAGGTGAACTACGGTGTGACCTATAGCTACAGCCGACAGACAGGTCA GGCCGATGCGGATAATTCACTATTTTTCTCGATGTCATTGCCGATTAGCACCTTGTTTGGTGGCAAAAGTGCCCCGCACT CAGCTTATGCCACCTACAGCGCCGGCAGAAACCAGCAGGGAGATATCTCCCATCAGGCCGGCCTGAGCGGCACGGCACTG AAAGATAACAACCTGAACTGGAGTCTCAGCCAGGGGATGACGCGCAATGAAGGCAATAGCGGCAGCCTGAGCACCTCCTA TCGTGGCGGGTATGGCAGCACCAATCTTGGCTATAGCTACAGTGACAGTTATAAGCAGACCAGCTATGGCGTCAGCGGAG GGGTGCTTTTACACAATGAAGGCGTGACGCTGGGGCAATCACTTGGTGAAACCAGCGTGCTGGTTGCCATGCCAGGGGTA GCCAATGCCAAAGTGGAAAATGAAACCGGCGTCAAAACCGACTGGCGGGGTTATGCCCTGCGGCCTTACGCCTCCGCTTA TCGTGAGAATCGTATCGCCATCGATACCGGCTCACTGGATGATCAAACCGATATGGATTCTACGGTAACCCGCGTGGTGC CTACCCGTGGTGCCGTGGTGAAGGCCGGATTTAAAGGCCATTCAGGTAGCCGGGTTCTGATGACCCTGACCAGCGCAGGC AAACCGCTTCCGTTCGGCACTATCGTCAAGGCTGGCGAGCGTGGCGGGATAGTTGGGGATGGTGGGCAGGTTTATCTGTC AGGCATGCCGGATAAGGGAACAGTCATCGCACAGTGGGGAGTCGATAAACAGTGCGTTGGCGATTATCGTCTGCCGTCAG CAACAAAGGAACAGCGCGATCCGGTGATCAGAATTAACAGTAACTGCAAATGA Protein sequence : MQISHNKKTVSTLNSPVRLPMSIMTLLMGAALFPSSGHAELYFAPELISSDPAMVADLTRLQNAGNQLPGAYEVDIYLNG TRVNERSLMFIDAPDARNKREVRDSTGLMACLNRSELEELGVDVRQIPADVGDTCISPGEFIPGAFTSFDFQRQRLEISV PQAALRTRAQGYISPERWDEGINAAMMNYSFSGSNNRGRYGDSRNTYLNLKGGINVGPWRLRDYRTWNEYSSDRYNYRKW QHVYTYAQRAIIPLRSNLMLGDGTSDGDIFDSLAFRGVQIATDDSMYPDSMRGFAPVIRGMANTNARVNIRQNGYTVYQT FVAPGAFAIDDLFPVYSSGDLEVTVTEADGSVRVFTVPYSSVPVLQREGRMKYSLTAGQYRSSSDSYNSPVFVQATLISG LPHNMTGYGGMQYAENYLSGLLGLGFNLGYLGAISADITQANSTLADGNQYQGRSLRFLYARSLNTLGTSFQLTGYRYST EGFHTLDETALKGMKGWRYEADTVAADGSLVKQPYTDYYNLYNNKRAKIQASVSQRAGDHGSLFLSGVRQTYWNTDGHYD SLQMGFNGAMGQVNYGVTYSYSRQTGQADADNSLFFSMSLPISTLFGGKSAPHSAYATYSAGRNQQGDISHQAGLSGTAL KDNNLNWSLSQGMTRNEGNSGSLSTSYRGGYGSTNLGYSYSDSYKQTSYGVSGGVLLHNEGVTLGQSLGETSVLVAMPGV ANAKVENETGVKTDWRGYALRPYASAYRENRIAIDTGSLDDQTDMDSTVTRVVPTRGAVVKAGFKGHSGSRVLMTLTSAG KPLPFGTIVKAGERGGIVGDGGQVYLSGMPDKGTVIAQWGVDKQCVGDYRLPSATKEQRDPVIRINSNCK |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| fim2D | AFH78429.1 | putative fimbrial usher protein | Virulence | KpGI-5 | Protein | 1e-177 | 47 |
| sfaF | CAC16953.2 | SfaF protein | Virulence | PAI III 536 | Protein | 1e-176 | 46 |
| lpfC | YP_006098365.1 | fimbrial outer membrane usher protein | Not tested | Tn2411 | Protein | 2e-126 | 41 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| EbC_11330 | YP_003740517.1 | outer membrane usher protein, fimbrial-like | VFG0876 | Protein | 1e-179 | 48 |
| EbC_11330 | YP_003740517.1 | outer membrane usher protein, fimbrial-like | VFG1645 | Protein | 8e-177 | 46 |
| EbC_11330 | YP_003740517.1 | outer membrane usher protein, fimbrial-like | VFG0446 | Protein | 1e-176 | 46 |
| EbC_11330 | YP_003740517.1 | outer membrane usher protein, fimbrial-like | VFG0912 | Protein | 6e-175 | 46 |
| EbC_11330 | YP_003740517.1 | outer membrane usher protein, fimbrial-like | VFG0454 | Protein | 6e-154 | 41 |
