Gene Information

Name : EbC_10920 (EbC_10920)
Accession : YP_003740476.1
Strain : Erwinia billingiae Eb661
Genome accession: NC_014306
Putative virulence/resistance : Unknown
Product : major capsid protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1260841 - 1261902 bp
Length : 1062 bp
Strand : +
Note : silverDB:661Eb01466

DNA sequence :
ATGAAACAGAAAACCCGCTTTGCCTTTAACGCCTACCTGATGCAGCTGGCCCGCCTGAACGGCGTGGAGGTCATTGACCT
GTCGAGCAAATTCAACGTGGAGGCGTCCGTGGCGCAGACGCTGGAAGACCAGATCCAGCAGTCGGCCGCATTTCTCACCA
ACATCAACGTGATCGGCGTGGCTGAACAGTCCGGCGAGCTGCTGGGGCTTGGCGTGGGCAGCACCATTGCTGGTACCACC
GACACCACCGCGAAAGACCGTGAGCCAACCGATCCAACGGTAATGGCGGGCGTCGAGTACAAGTGTGAGCAGACCAACTT
CGATACGGCGCTGACCTACGCGAAGCTGGACATGTGGGCCAAGTTCCAGGACTTCCAGGTGCGTATCCGGGACGCGATCA
TCAAGCGTCAGTCGCTGGACCGCATCATGATCGGCTTTAACGGCGTGAAGCGCGTCAAAACTTCCAACCGCGCAGAGAAT
CAGCTGCTGCAGGACGTGAACAAGGGCTGGCTGCAGAAGGTGCGTGAGGATGCGCCGGATAACGTGCTGGGCAGCAAAAC
GGCAGAAGATGGCACCACCACAGCCGCACCGGTGAAGGTGGGCAAAGGTGGCGCTTACGCCAACCTGGACGCGCTGGTGA
TGGATGCGGTCAATGAGCTTATCGATCCAATTTTCCAGGACGATGACGAGCTGGTTGTTATCTGCGGCCGTGAGCTGTTG
TCTGACAAGTATTTCCCGCTGGTCAACAGCGATCAGGCCAATACGGAAAAGCTGGCTGCTGACCTGATTATCAGCCAGAA
ACGCATGGGTGGCCTGCAGGCAGTCCGTGCGCCGTACTTCCCGGCCAATGCGGTGCTGATCACCCGCCTGGATAACCTGT
CCATCTACTGGCAGGAAGACACCCGCCGCCGTTCGGTTATCGACAATCCGAAGCGTGACCGCATCGAAAACTTTGAATCG
GTAAACGAAGCCTACGTTGTTGAGGATTACCGCTGCGCCGCGCTGGTAGAAAACATCACCATCGGCGACTTCTCAACCGT
GGCAGCGGAAGCAGGGGAGTAA

Protein sequence :
MKQKTRFAFNAYLMQLARLNGVEVIDLSSKFNVEASVAQTLEDQIQQSAAFLTNINVIGVAEQSGELLGLGVGSTIAGTT
DTTAKDREPTDPTVMAGVEYKCEQTNFDTALTYAKLDMWAKFQDFQVRIRDAIIKRQSLDRIMIGFNGVKRVKTSNRAEN
QLLQDVNKGWLQKVREDAPDNVLGSKTAEDGTTTAAPVKVGKGGAYANLDALVMDAVNELIDPIFQDDDELVVICGRELL
SDKYFPLVNSDQANTEKLAADLIISQKRMGGLQAVRAPYFPANAVLITRLDNLSIYWQEDTRRRSVIDNPKRDRIENFES
VNEAYVVEDYRCAALVENITIGDFSTVAAEAGE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
t4319 NP_807914.1 major capsid protein Not tested SPI-7 Protein 3e-142 86
STY4625 NP_458707.1 putative major capsid protein Not tested SPI-7 Protein 3e-142 86
unnamed ABR13466.1 predicted major capsid protein Not tested PAGI-6 Protein 3e-80 54