Gene Information

Name : ribD (EbC_09840)
Accession : YP_003740372.1
Strain : Erwinia billingiae Eb661
Genome accession: NC_014306
Putative virulence/resistance : Unknown
Product : riboflavin biosynthesis protein RibD
Function : -
COG functional category : H : Coenzyme transport and metabolism
COG ID : COG0117
EC number : -
Position : 1157325 - 1158431 bp
Length : 1107 bp
Strand : +
Note : silverDB:661Eb01337

DNA sequence :
ATGAGCGATGAAATCTGGATGGCGCGCGCCCTTGAGCTCGCCCGCCGTGGCCGGTTTACCACCACGCCCAATCCGAATGT
CGGCTGCGTGATTGTCCGCGATGGCGTGATGGTCGGCGAAGGCTACCATTTTCGCGCCGGTGAACCGCATGCTGAAGTCC
ACGCGCTGCGGATGGCTGGCGATAAGGCGCAAGGGGCAACGGCCTATGTCACCCTTGAACCCTGTAGCCACCACGGCCGG
ACGCCACCTTGCTGTGATGCGCTGATTGCCGCGGGCGTCAGCCGGGTTATTGCAGCGATGCAGGATCCCAATCCGGAAGT
GGCCGGTCGCGGGCTATATCGCCTGCAGCAGGCGGGCATTGAGGTCAGCCATGGGCTGATGATGCAGGAAGCAGAAGCAC
TTAATCGCGGCTTCCTGAAGCGGATGCGAACCGGTTTCCCATGGGTGCAGTTGAAGCTCGGCGCCTCTCTCGATGGCCGC
ACGGCGATGGCCAATGGCGAAAGCCAGTGGATCACCTCAGCAGAAGCCCGCCGCGACGTTCAACGCCTGCGCGCCCAGAG
TTCGGCTATCCTCAGCACCAGCGCCACCGTATTGGCCGATAATCCGTCGTTAACCGTGCGCTGGCAGGATTTAGCCGCGG
ATACCCAGGCCGCGTATGCCGAAGCGGATCTGCGCCAGCCGGTACGGGTGGTGATTGACAGTCAAAATCAGGTGACGCCT
GAGCACCGTTTGATTTCCCAGTCCGGTGAGACCTGGCTGGCACGCCAGCAGGCAGATAACCTGAACTGGCCGGAGAACGT
GGAGCAGTTCCTCGTTCCGCGCCATAATGACCATACCGATTTAGTGTCGCTGATGATGCTGCTGGGTCGCCGACAGATCA
ATACGGTCTGGGTGGAAGCCGGCGCAAAACTGGCCGGCGCACTGCTTACCGCGGGCGTCGTGGACGAGTTGATTGTCTAT
ATGGCACCGAAATTACTGGGAGATAATGCACGCGGTCTGTGCCATTTACCGGGCATAGCACATCTTGCTGACGCTCCCGC
CTTCACCTTCAGCGATAGTCGCCAGGTTGGGCCCGACATTCGCCTGACGCTGACGCCTGACTCTTAG

Protein sequence :
MSDEIWMARALELARRGRFTTTPNPNVGCVIVRDGVMVGEGYHFRAGEPHAEVHALRMAGDKAQGATAYVTLEPCSHHGR
TPPCCDALIAAGVSRVIAAMQDPNPEVAGRGLYRLQQAGIEVSHGLMMQEAEALNRGFLKRMRTGFPWVQLKLGASLDGR
TAMANGESQWITSAEARRDVQRLRAQSSAILSTSATVLADNPSLTVRWQDLAADTQAAYAEADLRQPVRVVIDSQNQVTP
EHRLISQSGETWLARQQADNLNWPENVEQFLVPRHNDHTDLVSLMMLLGRRQINTVWVEAGAKLAGALLTAGVVDELIVY
MAPKLLGDNARGLCHLPGIAHLADAPAFTFSDSRQVGPDIRLTLTPDS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00289 YP_008207754.1 Pyrimidine deaminase Not tested AbaR25 Protein 3e-58 46
BJAB0868_00293 YP_008211619.1 Pyrimidine deaminase Not tested AbaR26 Protein 3e-58 46