Gene Information

Name : trp1400B (EbC_pEb17200140)
Accession : YP_003739185.1
Strain :
Genome accession: NC_014305
Putative virulence/resistance : Unknown
Product : IS1400 transposase B
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG2801
EC number : -
Position : 7804 - 8598 bp
Length : 795 bp
Strand : +
Note : silverDB:pEb17000025

DNA sequence :
ATGAGCATACGCCAGGCATGCAGGACGTTATCGCTGAGCAGGACGGTGTATTGTTACCAGCCCGATACCCGGCGTGATGA
AGCGGTGATCCAGGTGCTGACCGGGTTGGCAGAGCGCTATCCCCGCTACGGCTTTAAAAAGCTTTTTCAGGTGCTGCGCA
GGCAGGGGCACGTCTGGAACCACAAGCGCGTACACCGGATTTACTGTCTGCTGAAACTGAATTTTCGACGCAACCGTAAG
CAACGTCTTCCGGTGCGCAATCCGGCTCCGCTGGCAACGCCGGAAGCGCTCAATCAGAGCTGGTCTATCGATTTTATGCA
CGACGCGCTGGTCTGTGGTCGGCGTTTTCGGACCTTCAACGTGGTGGATGATTTTAACCGCGAGGCCCTTGCGATAGAAA
TCGATCTGAATATTCCTGCGCAACGAATGGTGCGGGTTCTGGACAGGATAGTGGCGAATCGCGGATATCCGCTGAAGATG
CGGATGGATAACGGCCCGGAACTGATATCACTGGCTCTGGCGCAATGGGCTGAAGACCATGGTGTGATGCTGGAGTTTAT
CAAGCCGGGTAAGCCGACACAGAACGCGTTTATTGAGAGGTTTAACAGGACGTACCGGACAGAAATACTGGATTTTTACC
TGTTCAGAACGCTGAACGAAGCACGGGAAATCACAGAGCGCTGGCTGAATGAATACAACAGTGAGCGGCCCCATGAATCC
CTGAATAACCTGACATCGGAAGAATACCGGCTGATGGCTGAGAAACCGGAAATCTCAAAAAGTGTGTGGAACTAA

Protein sequence :
MSIRQACRTLSLSRTVYCYQPDTRRDEAVIQVLTGLAERYPRYGFKKLFQVLRRQGHVWNHKRVHRIYCLLKLNFRRNRK
QRLPVRNPAPLATPEALNQSWSIDFMHDALVCGRRFRTFNVVDDFNREALAIEIDLNIPAQRMVRVLDRIVANRGYPLKM
RMDNGPELISLALAQWAEDHGVMLEFIKPGKPTQNAFIERFNRTYRTEILDFYLFRTLNEAREITERWLNEYNSERPHES
LNNLTSEEYRLMAEKPEISKSVWN

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
trp1400B CAB46580.1 IS1400 transposase B Not tested HPI Protein 1e-114 94
unnamed ABR13352.1 insertion sequence IS407 OrfB Not tested PAGI-5 Protein 5e-34 44
unnamed ABR13540.1 insertion sequence IS407 OrfB Not tested PAGI-8 Protein 8e-43 42