Gene Information

Name : EbC_pEb10200790 (EbC_pEb10200790)
Accession : YP_003739136.1
Strain :
Genome accession: NC_014304
Putative virulence/resistance : Unknown
Product : replicative DNA helicase
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG0305
EC number : -
Position : 70249 - 71637 bp
Length : 1389 bp
Strand : -
Note : silverDB:pEb10200138

DNA sequence :
ATGCTAAAGCAGCCTGCCACTTCGTTAGATGTACCGATCTCGACAGAAGCCGAACAATGCGTTTTAGGTGCGTTGATGCT
GGATAATGATCGTTGGGATGAAATTAATCTTCTGTTGAAAACTCAGGATTTCTTCCTTGCTGCCCATCGCCATATATTCA
AAGCAATGAGCGTATTGTCTTCAAAATCCTCGCCTATTGATCTTATTACCCTTAGCGAAAAGCTGGAGCATGAGGGAGCG
CTAGATCATTGTGGCGGGTTTGCCTATTTAGCCGAGTTAAGCAAGAACACACCTTCAGCCGCAAACATTCTTGGTTATGC
GGCCATCGTTATCGAAAAGAGCCGTTTGCGAGCTCTGCAAATAATCGGCAATAGCCTTGTAGCTGATATTCATGCTAATC
GATTGAATTCACGAGAAGTTGCCGAGCATGCTGAAGATGCCCTTTTCGAACTTAGTGAGCAGGGCGTAAGCGCAAACGAG
TGCGAATCAGAGATTTTGTTTGCCCTTGACCAAGTGCTAAGCAAGCTCGAATTGGCTACCGCGATTGAAAACGGTATCAC
TGGTACATCCACAGGTATGTCTGAATTAGATTTCATGACTTGTGGCTTACAACCAGGAGACTTGATTCTTCTTGCTGCGC
GTCCCTCTATGGGGAAAACATCCTTGGCCGTCAGTTGGTGCATCGGTGCAATCGAAAGCAGGCCGCAGGAAGCTGTTTTT
ATTTTCAGCATTGAAATGCCAACCGATCAGCTGACCATGCGCATGCTATCAATGCGTAGCCGTGTTGATCTTACCAATCT
TCGTAGTGGCAACTTGAGTGACGAAGATTGGGGACGCATCAGTCAGGGAGCAAAAGAAATCGCTGCCTGGCGCGATCGTC
TCATTATTGATGACAACAGCTCTCAGACACCGGCAACTCTTCGCACCCGCGCTCGTCGCTATGTTCGTAAGTACGGAAAA
CCATCTCTAATCATGGTTGATTATCTTCAGCTTATGCGATGTCCAGATATGGAAAACAGAACGCAAGAAATTGCGGAGAT
TTCCCGATCGCTTAAAGCGCTGGGTAAAGAGCTAGGCTGTCCAGTTCTTGCTCTGTCTCAGCTCAACCGTCAGGTTGAGC
AGCGAGCCGATAAACGTCCCAACAATGGAGACCTTCGGGACTCAGGAGCACTCGAACAGGATGCTGACCTTATTGCTTTT
ATTTACCGCGATGAGGTTTACAACACCAACACGGCACATCCAGGTCAGGCTGAAATCATTATCAGTAAGCAGCGTCAGGG
GCCAACGGGCACAATCAAAACGCAATTTGACGGTAAGTTTACTCTCTTCAGTGAATACCCTGAGGGAGGGTATGACCTCG
GTTACAACTTCAGGAGTTCTGGGCAATGA

Protein sequence :
MLKQPATSLDVPISTEAEQCVLGALMLDNDRWDEINLLLKTQDFFLAAHRHIFKAMSVLSSKSSPIDLITLSEKLEHEGA
LDHCGGFAYLAELSKNTPSAANILGYAAIVIEKSRLRALQIIGNSLVADIHANRLNSREVAEHAEDALFELSEQGVSANE
CESEILFALDQVLSKLELATAIENGITGTSTGMSELDFMTCGLQPGDLILLAARPSMGKTSLAVSWCIGAIESRPQEAVF
IFSIEMPTDQLTMRMLSMRSRVDLTNLRSGNLSDEDWGRISQGAKEIAAWRDRLIIDDNSSQTPATLRTRARRYVRKYGK
PSLIMVDYLQLMRCPDMENRTQEIAEISRSLKALGKELGCPVLALSQLNRQVEQRADKRPNNGDLRDSGALEQDADLIAF
IYRDEVYNTNTAHPGQAEIIISKQRQGPTGTIKTQFDGKFTLFSEYPEGGYDLGYNFRSSGQ

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
PMI2640 YP_002152342.1 DNA helicase Not tested Not named Protein 8e-114 59
dnaB2 YP_001402701.1 replicative DNA helicase Not tested YAPI Protein 4e-117 58
api2 CAF28476.1 putative DNA binding protein with DNA-dependent ATPase activity Not tested YAPI Protein 3e-117 58
dnaB2 YP_001007676.1 putative DNA helicase Not tested YAPI Protein 2e-117 58
STY4522 NP_458617.1 DNA helicase Not tested SPI-7 Protein 6e-110 54
t4227 NP_807829.1 DNA helicase Not tested SPI-7 Protein 6e-110 54
unnamed ABR13456.1 replicative DNA helicase Not tested PAGI-5 Protein 9e-97 47
dnaB CAI36044.1 replicative DNA helicase DnaB Not tested PPHGI-1 Protein 1e-86 46
dnaB1 YP_005176258.1 replicative DNA helicase Not tested ICEPmu1 Protein 2e-85 46