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Name : topB (EbC_pEb10200720) Accession : YP_003739129.1 Strain : Genome accession: NC_014304 Putative virulence/resistance : Unknown Product : DNA topoisomerase Function : - COG functional category : L : Replication, recombination and repair COG ID : COG0550 EC number : 5.99.1.2 Position : 62929 - 64995 bp Length : 2067 bp Strand : - Note : silverDB:pEb10200125 DNA sequence : ATGCAGCTTTATCTATGTGAAAAACCCTCTCAGGCTAAAGATATTGCCCGCGTGCTGGGTGTGAGCCAGCGCGGGCAGGG ATGTATTAACGGCGGTAACATCACGGTGACGTGGGCTGTGGGGCATTTGCTTGAAACGGCCACGCCTGAAATTTACGGCG AGCAGTTTGGCCGTCCGTGGAGAGCGGAGGTGCTGCCAATTATCCCGGACCGCTGGCAAATGACCGTAAAAAAAGACACT GCCGACCAGTTTGCCGTCATCAAAAAGCTTCTAAAGCAGGCCAGTGAAGTGGTGATCGCGACCGATGCCGATCGTGAAGG TGAAGTGATCGCGCGCGAGCTGATGGAGTATTGCAATTACAGAGGTGCCGTCCGCCGATTGTGGCTTTCCGCGCTGGACG AAGCCAGTATCAAAAAAGCCCTCGGTGAAATGTTGCCGGGTGATAAGACTGAAATGCTCTATCAGGCCGGTGTCGGTCGA TCGCGGGCAGACTGGCTTATCGGGATGAACCTGACGCGGCTTTATACCCTGAAAGCGGGTGAAGCCGGAGTATCAGAGGT GTTTTCCGTGGGGCGCGTGCAGACGCCCACGCTCGCTATAGTGGTTAACCGCGATCTTGAGATTGCGGGCTTCACACCGA AGCCGTGGTGGAAGGTTAGAGCACAGCTGCAAAAAGACGATGTTTCATTTGAGGCCGAATGGGTTGCTGCGGCGCAATAC TGCGACGATGAAAAGCGGTGTGTTAACCATCCGATTGCCCAGGCTGTTCAGCAGCTCTGCCAGAAAGCTGGCAGCGGCAG CGTGATCTCCGTTGAGAAAAAGCGCGATAAAACGCCGGCACCGCTGTGTTTTACTCTCGGCACGCTGATGGAAGTCTGCA ACAAGAAATGGGGTTTTGGGGCTAATGAGGTGCTCTCAATAGCCCAGTCGCTGTATGAAACGCATAAGGCGACGACCTAT CCGCGGACAGACTGCGGTTATCTGCCCGTTTCGATGCGCGAAGAGGTCAGGGACGTGCTCCAAGCCATACAGCACTCCGA TCCGTCTATCACCCCCGAGCTTGCCCGTCTTGATACCGCATTTACCTCGCGCGTCTGGAACGACAAGAAAATTACCGCGC ACCACGCGATTATCCCGACTCGACAGCCATTCGAAATAGCAAAGCTGAACGCGAAAGAGCTCAAAGTCTACTCTCTTATC CGGCTGCACTATCTGGCCCAGTTTATGCCGCTGCAGGAATCTGATGTGACGGATGCCACCTTCAACATTGGGAATCAGCT TTTCCGCACGCGCGGGCGCGTGATGATTCATGCCGGGTGGAAATCACTCTTCAGCGGCCAATTGTCCGAAGAGGGGGAAG AAGATAAGGAGTCCGCCGCCCAGCTGCCTGCGCTGGAGCAGGGGAGCGTCTGCAGCGTCACCGGTGCCGACGTCAAAGAT AATATGACCAAAGCGCCGCCGCATCATACGGAAGGAACGCTTATTGCCGCCATGAAAAACGCGGCCAGCCTGGTCACGGA TCCTCAGCTCAAGAAGGTGCTGCGCGATAACGCAGGACTGGGAACGGAAGCGACGCGCAGCGGCGTACTGGAAACGCTGT TTAAACGGGGTTTCTTGGAGAAAAAGGGCAAATTTATCCAGGCCACTCAGATGGCGCGGGAACTTATCGCGGCATTGCCT GAAACGCTGACCAGCCCGGGCATGACAGCCCTTTGGGAGCAGGCGCTGGATGATATTGCCCAAGGCAAAAGCGGGCTCAG TGATTTTATGCAAAAGCAAACACAGTGGACCCGGCATCTTATTGAAAAAGGGCGTGTCGCTGCCTTTAAAATTACGGTAC CGGTCGGACCTTCCTGTCCTAAGTGCGGCGGACCGACTCAACAGCGCAAGAATAAAGAGGATAAGTTCTGGGGCTGCATG AAGTTTCCGGACTGTAAGGGGATCGTTGGTGAGACGAACCGTAAAACCCGACGTCAGGCGGCGGGGAAATCCCGGGGGGG TGGCAAAGCGAAGAGAGGCTCCGCGTCGGTACCGGCGACCATTCAGCTGCAAAGTCAGAAAGGTTGA Protein sequence : MQLYLCEKPSQAKDIARVLGVSQRGQGCINGGNITVTWAVGHLLETATPEIYGEQFGRPWRAEVLPIIPDRWQMTVKKDT ADQFAVIKKLLKQASEVVIATDADREGEVIARELMEYCNYRGAVRRLWLSALDEASIKKALGEMLPGDKTEMLYQAGVGR SRADWLIGMNLTRLYTLKAGEAGVSEVFSVGRVQTPTLAIVVNRDLEIAGFTPKPWWKVRAQLQKDDVSFEAEWVAAAQY CDDEKRCVNHPIAQAVQQLCQKAGSGSVISVEKKRDKTPAPLCFTLGTLMEVCNKKWGFGANEVLSIAQSLYETHKATTY PRTDCGYLPVSMREEVRDVLQAIQHSDPSITPELARLDTAFTSRVWNDKKITAHHAIIPTRQPFEIAKLNAKELKVYSLI RLHYLAQFMPLQESDVTDATFNIGNQLFRTRGRVMIHAGWKSLFSGQLSEEGEEDKESAAQLPALEQGSVCSVTGADVKD NMTKAPPHHTEGTLIAAMKNAASLVTDPQLKKVLRDNAGLGTEATRSGVLETLFKRGFLEKKGKFIQATQMARELIAALP ETLTSPGMTALWEQALDDIAQGKSGLSDFMQKQTQWTRHLIEKGRVAAFKITVPVGPSCPKCGGPTQQRKNKEDKFWGCM KFPDCKGIVGETNRKTRRQAAGKSRGGGKAKRGSASVPATIQLQSQKG |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| topB | AAF14809.1 | topoisomerase B | Not tested | SPI-7 | Protein | 0.0 | 59 |
| topB | NP_458624.1 | topoisomerase B | Not tested | SPI-7 | Protein | 0.0 | 59 |
| topB | NP_807836.1 | DNA topoisomerase III | Not tested | SPI-7 | Protein | 0.0 | 59 |
| PMI2630 | YP_002152332.1 | DNA topoisomerase III | Not tested | Not named | Protein | 0.0 | 56 |
| pph56 | CAI36097.1 | Topoisomerase IA | Not tested | PPHGI-1 | Protein | 9e-170 | 52 |
| topB | AAN62317.1 | putative DNA topoisomerase III | Not tested | PAGI-3(SG) | Protein | 6e-161 | 51 |
| topB | AAN62194.1 | putative DNA topoisomerase III | Not tested | PAGI-2(C) | Protein | 3e-168 | 50 |
| topB1 | YP_005176228.1 | DNA topoisomerase III | Not tested | ICEPmu1 | Protein | 2e-150 | 48 |
| topB | AAW83109.1 | TopB | Not tested | GGI | Protein | 6e-124 | 42 |
