Gene Information

Name : EbC_pEb10200640 (EbC_pEb10200640)
Accession : YP_003739121.1
Strain :
Genome accession: NC_014304
Putative virulence/resistance : Unknown
Product : lytic transglycosylase, catalytic
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 58022 - 58624 bp
Length : 603 bp
Strand : -
Note : silverDB:pEb10200112

DNA sequence :
GTGGCGATGATGCTTATCCCTCTCTCCACGTTCGCAGATGGCAAACAGATGGTCCCAGAGGGATACGTGCGCGTTGCGCA
GGCTCACAGCGTGCCGCCCGAGTCGCTCTATTCCGTCAGCCTGCAGGAATCATCGCGCCGCCTGCCGCAGGGTGAGCGCC
CGTGGCCGTGGACCCTTAACGTGGCGGGCAAGGGATATCGTTATAAAACCCGTCTGGAAGCGTGGCAGGCGCTGCAGGTT
TTCATGAAGAAGAACTCCCTGAAGCGCATTGATGTAGGGATTGCTCAGGTTAATCTTGGCTGGAACGGGCAGCGCTTCTC
GTCCACTTGGGAAGCGCTGGATCCTTACAAAAATCTGAACGCCGCTGCCGCCATTCTGCGCGAGTGCTGGGACAGAAAAC
CGGGCAGCTGGCTCGATGCAGCCGGCTGCTATCACCACCCCGCTGGCGGCGCTCCCGCTGCCCGCTATCGCGCTTTTGTC
AAAACCAAACTCGCCTTGCTCCAGTCCTCACCGCATCTGCCGGCGGCGACTGCGGTTGAGCAGACAGCATCCGCATCGGT
GCCGGATACCGGCCTCGTCTGGATAAATCCACGGAGTCAGTGA

Protein sequence :
MAMMLIPLSTFADGKQMVPEGYVRVAQAHSVPPESLYSVSLQESSRRLPQGERPWPWTLNVAGKGYRYKTRLEAWQALQV
FMKKNSLKRIDVGIAQVNLGWNGQRFSSTWEALDPYKNLNAAAAILRECWDRKPGSWLDAAGCYHHPAGGAPAARYRAFV
KTKLALLQSSPHLPAATAVEQTASASVPDTGLVWINPRSQ

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
STY4559 NP_458645.1 hypothetical protein Not tested SPI-7 Protein 5e-36 58
t4257 NP_807855.1 hypothetical protein Not tested SPI-7 Protein 5e-36 58
PMI2591 YP_002152310.1 lytic transglycosylase Not tested Not named Protein 1e-32 55
api25 CAF28499.1 conserved hypothetical protein Not tested YAPI Protein 2e-35 55
YpsIP31758_3720 YP_001402674.1 transglycosylase Not tested YAPI Protein 2e-35 55
YE3494A YP_001007653.1 hypothetical protein Not tested YAPI Protein 5e-35 54