Gene Information

Name : EbC_pEb10200460 (EbC_pEb10200460)
Accession : YP_003739103.1
Strain :
Genome accession: NC_014304
Putative virulence/resistance : Unknown
Product : hypothetical protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 39857 - 40831 bp
Length : 975 bp
Strand : -
Note : silverDB:pEb10200085

DNA sequence :
ATGCGTGAAACGCTCAGATCACATTTAAATGCGGCCGGCGTTGCCTCGGTGCTCGCTGTAGCGGCGGCTCCGGCAACGGT
GTCGGCCATTAATACTGCCGGCATTATTGCCAGCGCCATCACTCAGGATTGTATCAGCTGGCGCGTCAGTGGCCTCTGTT
ACTGGCTGATGTGTACGCCGTTTGGTTGTTCGGTGAAAACCTCCGTCAAGGTGACGCATTTTATCCCTGAAGTGGTGGTA
TCCACTTACACCGGGCCCGGCGGAAACCCATGGACCGAGATGGCCTTTATGAGCGGAGCATCCGGTACGATCGATAATGC
GCTAACCAGCGGTGCGCCAGCAGGCGGCGGCAACGCCGGTGATATTAAGAATCCCGGGCAGCGCAAGTCGAACATCAAAT
TCAAATACGCCGACGCAATCGGCCACCCCGCCACCTCCGTCATTGGTGGCAGTATTGCCGGGTATTCGTGCGATACGGCC
GCCACGCCATTCAATCCTTACTTTCTGAGCACGTTGGATTCACTTGTCTGGCGATCGGGGCTGCCTGAATCGCTCTATCC
GGAAGCGCTTGTCTCCGGGCAGCGTGAACTGGGTAGCCAAGCCAGCGCGAACATGTGGGGCAATATTTATCCCCGCTCAG
GCTTCGTCAGCCAGGCCGACGATGACAAAGCGTCCGCCGTGGTCGCTCAGCGCGTCGCAGACATTATCACCCGCTCCGGG
CAACCGCACGTTTACCAAGTACTGAAAGGCACCCACAAAGCCGGTTACTGGCCGCCTGGAGAAGTAAAGGAAAACACCGG
CACGGCAAATCATAAATGGCAGCGCCTGTCACCCACGCTTTCAGCTTCCTGCGCGGTTTTTCCTGACGGCGCATATCCCA
TCGCTCAGGACGGCAACGAAGCGTACGCCCTCTGGCAGCCCTACAGCTGCTGCAAGCGACGCGGCCAGACCTTCCTCTAT
TCAACTGACTTCTGA

Protein sequence :
MRETLRSHLNAAGVASVLAVAAAPATVSAINTAGIIASAITQDCISWRVSGLCYWLMCTPFGCSVKTSVKVTHFIPEVVV
STYTGPGGNPWTEMAFMSGASGTIDNALTSGAPAGGGNAGDIKNPGQRKSNIKFKYADAIGHPATSVIGGSIAGYSCDTA
ATPFNPYFLSTLDSLVWRSGLPESLYPEALVSGQRELGSQASANMWGNIYPRSGFVSQADDDKASAVVAQRVADIITRSG
QPHVYQVLKGTHKAGYWPPGEVKENTGTANHKWQRLSPTLSASCAVFPDGAYPIAQDGNEAYALWQPYSCCKRRGQTFLY
STDF

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
STY4576 NP_458661.1 hypothetical protein Not tested SPI-7 Protein 1e-99 68
t4273 NP_807871.1 hypothetical protein Not tested SPI-7 Protein 1e-99 68
api54 CAF28528.1 conserved hypothetical protein Not tested YAPI Protein 4e-95 68
YE3467 YP_001007628.1 hypothetical protein Not tested YAPI Protein 1e-90 68
YpsIP31758_3701 YP_001402655.1 hypothetical protein Not tested YAPI Protein 3e-95 67
PMI2573 YP_002152292.1 hypothetical protein Not tested Not named Protein 3e-87 64
unnamed AAX39458.1 unknown Not tested Hrp PAI Protein 2e-79 63
pph89 CAI36130.1 hypothetical protein Not tested PPHGI-1 Protein 1e-73 52
ORF SG51 AAN62273.1 hypothetical protein Not tested PAGI-3(SG) Protein 5e-69 51
RL017 AAP84144.1 conserved hypothetical protein Not tested PAPI-1 Protein 9e-70 50
unnamed ABR13357.1 hypothetical protein Not tested PAGI-5 Protein 3e-69 49
EXA20 ABD94629.1 conserved hypothetical protein Not tested ExoU island A Protein 3e-69 49
ORF C43 AAN62136.1 hypothetical protein Not tested PAGI-2(C) Protein 3e-69 49
Pmu_02990 YP_005176198.1 integrating conjugative element protein, PFL family Not tested ICEPmu1 Protein 1e-60 49