Gene Information

Name : HacjB3_05890 (HacjB3_05890)
Accession : YP_003736361.1
Strain : Halalkalicoccus jeotgali B3
Genome accession: NC_014297
Putative virulence/resistance : Resistance
Product : zinc-transporting ATPase
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG2217
EC number : -
Position : 1103488 - 1105878 bp
Length : 2391 bp
Strand : -
Note : COG2217 Cation transport ATPase

DNA sequence :
ATGAGTACTCCCGATCGAGACTCGAGTGACGCCGGCGGCGAACCCGGTTCCGGCGCCGGTTCACACGACCACCCGGGTGA
ACGGACCGCTGTGGCTCGGTTCGGCGTCCCCGGAATGGACTGTCCCTCGTGTGCGGGAAAGATCGAGAACGCACTCGACA
GCCTCGCGGGCGTCTCTGCGATCGACGCGCGGCCGACGACCGGATCGGTACGCGTCACGTACGACCCAAACGCCCTCGAC
GAGGCGGGGATGAAAAGCGCCATCGAGAGCGCCGGCTACGAGGTCGTCGAGAGCAGCACCGACGCCGGCGACGACGCCGA
CGGGAGCGACACGCGAGAGGACATCCGGACGAGTCCGCGCGCGCTCAAGACGTGGGCGAGTGGCGTTTTCGTCGCGGCCG
GGCTCCTCTTCGAGTTCCTGCTGACCGGTTCGAACGTCCAGCTCGCGAGCGTCGTGGGTCGCGAGTTGCTCGTCGCCGAC
ATCGCTTTCCTCGTCGCCGTCGCCGTCGGCGGTCAGGAGATCGTCCGTAACGGTTACTACTCGGCGCGGAACCTGAACCT
CGACATCGATTTCCTGATGTCGGTGGCCATCCTCGGCGCGCTGGTCGCGAGCGTGGCCTTCGGGGAGGCGCTGTACTTCG
AGGCCGCCACGCTCGCGTTTCTCTTCAGCGTCGCCGAACTCCTCGAACGCTACTCGATGGACCGCGCGCGCAACTCGCTG
CGTGAACTGATGGACCTCTCGCCGGAGGAGGCGACGGTCAGACGGGACGGCGAGGAGGTGACCGTTCCGGTCGACGAGCT
CGCGGTCGGGGACGTCGTGGTCGTCCGCCCGGGCGAGAAGATCCCGACCGACGGGGAGGTCCTAGAGGGCGAAAGCGCCG
TCAATCAGGCCCCGATCACCGGCGAGAGCGTCCCCGTCGACAAGACCGTCGGCGAGGGGGTCTACGCCGGGACGATCAAC
GAGGAGGGGTACCTCGAAGTGCAGGTCACCTCCGCGGCGGGCGAAGACACCCTCTCGCGGATCGTCGAGCTGGTCGAGGA
CGCACAGTCGAACCGGACCGAACGCGAGCAGTTCGTCGAGCGGTTCTCGGCGTACTACACGCCGGTCGTCGTCGCCTTCG
CCGTGCTCGTAACGCTCGCCAGTCCCGCCGTGCTCGGAACCACGTGGCCGACGGCAATCGTCTACGGGCTGACGTTGCTG
GTGCTTGCCTGCCCGTGTGCGTTCGTCATCTCGACGCCCGTCTCCGTGGTTTCGGGAATCACCAGCGCCGCGAAAAACGG
CGTTCTGATCAAGGGCGGAAACCACCTCGAGGCGATGGGTGAGATCGACGTCGTCGCCTTCGATAAGACCGGGACGATCA
CGAAGGGCCAACTCACCGTCACCGACGTCGTCGCGCTGAACGGTACCAGCGAGGAGGACGTCCTGCGGTGTGCGCGCGGG
CTCGAACGCCGCAGCGAACACCCGATCGGCGAAGCCATCGTCGCCTACGCCGAACGGGAGCAGGTCGACGAGCGCGAGAT
CGAGGAGTTCGAGAGCATCACCGGCAAGGGTGTCCGTGCCGACCTCGACGGGACGCCCCACTTCGCGGGCAAACCCGGCC
TGTTCGAGGAGCTCGGGTTCGACCTCTCGCACGTCCACGCGACGACCGACGGCGGCGCAGTCACGCGGACCGCCCGCAAG
CTCTGTGAGCGAAACGACTGTCTGGACCTGCTCGAGGACACGGTCCCCCGGCTCCAGTCCGAGGGCAAGACGGTCGTCCT
CGTCGGGACCGACGAGGAACTCGAGGGGGTCATCGGCGTCGCCGACGAGATCCGACCGGAAGCCGCCGCGACGGTCGCCC
GACTCCGGGAACTCGGTGTCGAACGGACCGTCATGCTCACCGGCGACAACGAGCGCACCGCCCGCGCGATCGCAGACCAG
GTCGGCGTCGACGAGTATCGGGCCGAACTGCTCCCCGAGGAGAAAGTCGGCGCGATCGAGGAGCTCGTCGCGACCCACGA
GGGGGTTGCGATGATCGGCGACGGGATCAACGACGCACCCGCGCTCGCGACGGCGACCGTCGGCATCGCGATGGGTGCGG
CGGGTACCGACACCGCCCTCGAAACGGCGGACATCGCCCTGATGGCCGACGACCTCTCGAAACTCCCCTACCTGTACGAA
CTCGCACACGACGCAAACGGGGTCATCCGGCAGAACGTCTACGCGAGCCTCGCGGTCAAGGCCACCCTCGCGATCGGGGT
ACCCTTCGGCTACGTCCCGATCTGGCTGGCCGTTCTCGCCGGTGACGCCGGGATGACGACGGCCGTGACGGGCAATGCGA
TGCGACTGTCCCGGATCACGTCCGACGACGCCGGCGCTCGGGACCAGGAAGCCCCCAGCCGAACCGCCTGA

Protein sequence :
MSTPDRDSSDAGGEPGSGAGSHDHPGERTAVARFGVPGMDCPSCAGKIENALDSLAGVSAIDARPTTGSVRVTYDPNALD
EAGMKSAIESAGYEVVESSTDAGDDADGSDTREDIRTSPRALKTWASGVFVAAGLLFEFLLTGSNVQLASVVGRELLVAD
IAFLVAVAVGGQEIVRNGYYSARNLNLDIDFLMSVAILGALVASVAFGEALYFEAATLAFLFSVAELLERYSMDRARNSL
RELMDLSPEEATVRRDGEEVTVPVDELAVGDVVVVRPGEKIPTDGEVLEGESAVNQAPITGESVPVDKTVGEGVYAGTIN
EEGYLEVQVTSAAGEDTLSRIVELVEDAQSNRTEREQFVERFSAYYTPVVVAFAVLVTLASPAVLGTTWPTAIVYGLTLL
VLACPCAFVISTPVSVVSGITSAAKNGVLIKGGNHLEAMGEIDVVAFDKTGTITKGQLTVTDVVALNGTSEEDVLRCARG
LERRSEHPIGEAIVAYAEREQVDEREIEEFESITGKGVRADLDGTPHFAGKPGLFEELGFDLSHVHATTDGGAVTRTARK
LCERNDCLDLLEDTVPRLQSEGKTVVLVGTDEELEGVIGVADEIRPEAAATVARLRELGVERTVMLTGDNERTARAIADQ
VGVDEYRAELLPEEKVGAIEELVATHEGVAMIGDGINDAPALATATVGIAMGAAGTDTALETADIALMADDLSKLPYLYE
LAHDANGVIRQNVYASLAVKATLAIGVPFGYVPIWLAVLAGDAGMTTAVTGNAMRLSRITSDDAGARDQEAPSRTA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
cadA BAC57487.1 Probable cadmium-transporting ATPase (Cadmium efflux ATPase) Not tested Type-IIIinv SCCmec Protein 4e-122 42
unnamed BAB47609.1 cadmium resistance protein B Not tested Type-III SCCmec Protein 3e-122 42
SE0075 NP_763630.1 cadmium resistance protein B Not tested SCCpbp4 Protein 5e-118 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
HacjB3_05890 YP_003736361.1 zinc-transporting ATPase BAC0298 Protein 9e-91 44
HacjB3_05890 YP_003736361.1 zinc-transporting ATPase BAC0092 Protein 9e-90 42
HacjB3_05890 YP_003736361.1 zinc-transporting ATPase BAC0100 Protein 2e-60 41