Gene Information

Name : sitA (Pvag_pPag30486)
Accession : YP_003730227.1
Strain :
Genome accession: NC_014258
Putative virulence/resistance : Virulence
Product : iron ABC transporter substrate-binding
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG0803
EC number : -
Position : 485273 - 486187 bp
Length : 915 bp
Strand : -
Note : -

DNA sequence : 
ATGGTCCCGATAAAAAAGTTCACCACGCTGTTACTGAGCGCACTGCTCATAAACCTGATGGCGAGCAGCAGCTATGCAGC
AGAAAAATTTAAGATAGTGACAACGTTTACGGTGATAGCTGACATGGCTGAGAACGTGGCCGGCGATGCCGCAGATGTCA
CCTCTATTACTAAGCCCGGTGCTGAAATACACGAATATCAGCCCACGCCCGGTGACATCCGGCGGGCGCAGGGTGCGCAG
TTAATTATGGCGAACGGGCTTAATCTGGAACGCTGGTTTCAGCGCTTTTATCAGCATCTGGACGGCGTCCCGGAAGTGGT
GGTCTCCGCTGGTGTAACGCCGATGGGCATTGGCGAAGGGCCCTATAATGGTAAACCGAATCCGCACGCCTGGATGTCAC
CGGACAATGCGCTGATCTATGTCGATAACATCCGCGATGCGCTGGTGAAATATGACCCGGTGAACGCAGAGACCTACCGT
CAGAACGCTGCCGCCTATAAGCAAAAAATTATCGCGGCACTGGATCCGCTGCGCCAGCAGATTGCCGCTATTCCTGAGCA
GAAACGCTGGATGGTGACCAGTGAAGGCGCGTTCTCCTATCTGGCGCGTGACCTGGGCATGAAAGAGCTTTACCTGTGGC
CGATCAATGCTGACCAGCAGGGTACGCCGCAGCAGGTGAGACGCGTGATTGACCAGGTGAAGAAAAATGCCATTCCGGCG
GTGTTCAGTGAAAGCACCGTGTCAGATAAGCCCGCCCGCCAGGTCGCGCGGGAGACCGGTGCCCATTACGGTGGTGTGCT
TTACGTCGACTCCTTAAGTAACGCGGAGGGACCGGTGCCAACCTATCTTGATCTGCTCAAAGTCACCACAGAGACACTGG
TGCAGGGCATTAAAGCGGGAGAGAAAGCGCAATGA

Protein sequence : 
MVPIKKFTTLLLSALLINLMASSSYAAEKFKIVTTFTVIADMAENVAGDAADVTSITKPGAEIHEYQPTPGDIRRAQGAQ
LIMANGLNLERWFQRFYQHLDGVPEVVVSAGVTPMGIGEGPYNGKPNPHAWMSPDNALIYVDNIRDALVKYDPVNAETYR
QNAAAYKQKIIAALDPLRQQIAAIPEQKRWMVTSEGAFSYLARDLGMKELYLWPINADQQGTPQQVRRVIDQVKKNAIPA
VFSESTVSDKPARQVARETGAHYGGVLYVDSLSNAEGPVPTYLDLLKVTTETLVQGIKAGEKAQ

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
sitA YP_217781.1 iron transporter: fur regulated Virulence SPI-1 Protein 3e-111 81
sitA NP_457255.1 Iron transport protein, periplasmic-binding protein Virulence SPI-1 Protein 2e-111 81
sitA NP_806464.1 iron transporter periplasmic-binding protein Virulence SPI-1 Protein 2e-111 81
sitA NP_461782.1 periplasmic binding protein Virulence SPI-1 Protein 2e-111 81
sitA AAD41065.1 SitA Virulence centisome 63 pathogenicity island Protein 2e-111 81

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
sitA YP_003730227.1 iron ABC transporter substrate-binding BAC0349 Protein 1e-111 81
sitA YP_003730227.1 iron ABC transporter substrate-binding BAC0439 Protein 5e-89 65

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
sitA YP_003730227.1 iron ABC transporter substrate-binding VFG0525 Protein 1e-111 81