Gene Information

Name : sitB (Pvag_pPag30485)
Accession : YP_003730226.1
Strain :
Genome accession: NC_014258
Putative virulence/resistance : Virulence
Product : iron transport protein ATP-binding protein SitB
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG1121
EC number : 3.6.3.25
Position : 484461 - 485276 bp
Length : 816 bp
Strand : -
Note : -

DNA sequence : 
ATGACAGACACCATTGTGGTTTCAGGCGTTACGGTAACCTGGCGCAACGGACACACTGCGCTGCATGATGCCAGCTTCAG
CGTGCCGGGCGGATCGATCGCCGCGCTGGTGGGCGTTAATGGCTCCGGCAAGTCAACCCTGTTTAAAGCGCTGATGGGAT
TTGTGCGGCTCGCCAGCGGCAGCATCTCGGTACTGGGGATGCCGACCCGCCAGGCGCTGCGCCAGAGTCTGGTCGCCTAC
GTGCCGCAGTCGGAAGAGGTGGATTGGTCGTTTCCGGTGCTGGTGGAAGATGTGGTGATGATGGGGCGCTACGGGCACAT
GGGTCTGCTGCGCCGGCCAAAGTCGCATGACCAGCAGATTGTCAGTGAGGCGCTGGCGCGGGTCGATATGCTGGATTATC
GCCATCGTCAGATCGGCGAACTCTCTGGCGGGCAGAAGAAAAGGGTGTTTCTGGCGCGTGCGATTGCGCAGCAGGGCAGC
GTGATCCTCCTGGACGAGCCGTTTACCGGCGTGGATGTTCAGACCGAGGCCAGAATCATCAGCCTGCTGGGGGAATTGCG
CGATGAAGGTAAAACCATGCTGGTTTCCACCCATAATCTGGGCTCGGTTACGGAGTTCTGTGATTACACCGTGATGGTAA
AAGGCACCGTTCTGGCCAGCGGCCCGACCCGGACTACGTTTACCGCCGCTAATCTTGAGCGCGCGTTCAGCGGGGTATTG
CGTCATGTGATGGTGAAGGGGCTGGACGATCAGATCATCACCGATGATGAACGTCCCTTTATTGCACCTCATGCCGCACG
GGAAGAGGGGAGCTAA

Protein sequence : 
MTDTIVVSGVTVTWRNGHTALHDASFSVPGGSIAALVGVNGSGKSTLFKALMGFVRLASGSISVLGMPTRQALRQSLVAY
VPQSEEVDWSFPVLVEDVVMMGRYGHMGLLRRPKSHDQQIVSEALARVDMLDYRHRQIGELSGGQKKRVFLARAIAQQGS
VILLDEPFTGVDVQTEARIISLLGELRDEGKTMLVSTHNLGSVTEFCDYTVMVKGTVLASGPTRTTFTAANLERAFSGVL
RHVMVKGLDDQIITDDERPFIAPHAAREEGS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
sitB NP_806465.1 iron ABC transporter ATP-binding protein Virulence SPI-1 Protein 4e-100 80
sitB NP_461783.1 ATP-binding protein Virulence SPI-1 Protein 2e-100 80
sitB YP_217782.1 iron transporter: fur regulated Virulence SPI-1 Protein 1e-100 80
sitB AAD41066.1 SitB Virulence centisome 63 pathogenicity island Protein 1e-100 80
sitB NP_457256.1 Iron transport protein, ATP-binding component Virulence SPI-1 Protein 4e-100 80

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
sitB YP_003730226.1 iron transport protein ATP-binding protein SitB BAC0350 Protein 7e-101 80
sitB YP_003730226.1 iron transport protein ATP-binding protein SitB BAC0440 Protein 2e-77 63
sitB YP_003730226.1 iron transport protein ATP-binding protein SitB BAC0400 Protein 6e-44 44

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
sitB YP_003730226.1 iron transport protein ATP-binding protein SitB VFG0526 Protein 7e-101 80