|
Name : sitD (Pvag_pPag30483) Accession : YP_003730224.1 Strain : Genome accession: NC_014258 Putative virulence/resistance : Virulence Product : iron transport system membrane protein SitD Function : - COG functional category : P : Inorganic ion transport and metabolism COG ID : COG1108 EC number : - Position : 482729 - 483598 bp Length : 870 bp Strand : - Note : - DNA sequence : ATGTGGATCCTTGACCCTTTCCGGTTTGCATTTATGAATAGCGCATTGCTTATCGCGCTGGTCGTGGCAATCCCTTGTGC GCTGCTGTCGGTGTTTCTGGTGCTAAAAGGCTGGGCGCTGATGGGCGATGCCATGAGCCATGCGGTATTCCCTGGCATCG TGCTCGCGTGGATGGCAGGACTGCCGCTGGCGGTGGGTGCGTTTGTTGCAGGACTGTTCTGTGCCGTCGCCAGTGGTTTC CTGCAGGACAACAGCCGCATTAAGCAGGACACCGTGCTGGGCATTGTCTTCTCCGGCATGTTCGCGGTGGGACTAATCCT CTATATCGCTGTGAAACCTGAAGTGCACCTGGATCATATCCTGTTTGGGGACATGCTTGGCATCACCGGCGCAGATATCG TTCAGACAGCGATTATCGCGTTGATCATCGTTATGGTGATTGTAATGAAGTGGCGTGATTTTATGCTGTTCAGCTTCGAC CCTCAGCAGGCACAGGTCTCTGGCTTACCCGCCCGTCTGCTGCATTATGGGCTGCTCTGCATGGTCTCGCTGACCATTGT AGCGACGCTGAAAGCGGTGGGGGTCATCCTGTCGATCTCCCTGCTGATCGCGCCCGGCGCTATTGCGGTGCTGCTCACCC GTCGTTTTTCACATGCGCTGCTGGTGGCGGTTATGGTGTCGGTGCTGGTATCGCTGAGCGGCGTTTATCTCTCGTTCTTT ATCGACAGTGCGCCTGCGCCGACGATCGTGGTGTTGTTTGCTGTGGTGTTTGTCGTAGCGATGGTCATTGCGGGAGGGAA AACACGGCAGCGGGAACGGCTGAAACATCGGTCTGGCGAAAAGAGCGTCTGTGGTGATAAACCATCCTGA Protein sequence : MWILDPFRFAFMNSALLIALVVAIPCALLSVFLVLKGWALMGDAMSHAVFPGIVLAWMAGLPLAVGAFVAGLFCAVASGF LQDNSRIKQDTVLGIVFSGMFAVGLILYIAVKPEVHLDHILFGDMLGITGADIVQTAIIALIIVMVIVMKWRDFMLFSFD PQQAQVSGLPARLLHYGLLCMVSLTIVATLKAVGVILSISLLIAPGAIAVLLTRRFSHALLVAVMVSVLVSLSGVYLSFF IDSAPAPTIVVLFAVVFVVAMVIAGGKTRQRERLKHRSGEKSVCGDKPS |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| sitD | AAD41068.1 | SitD | Virulence | centisome 63 pathogenicity island | Protein | 5e-77 | 71 |
| sitD | NP_457258.1 | Iron transport protein, inner membrane component | Virulence | SPI-1 | Protein | 7e-77 | 71 |
| sitD | NP_806467.1 | iron transporter inner membrane protein | Virulence | SPI-1 | Protein | 7e-77 | 71 |
| sitD | YP_217784.1 | iron transporter: fur regulated | Virulence | SPI-1 | Protein | 7e-77 | 71 |
| sitD | NP_461785.1 | permease | Virulence | SPI-1 | Protein | 7e-77 | 71 |
| sitC | NP_806466.1 | iron transporter inner membrane protein | Virulence | SPI-1 | Protein | 3e-35 | 42 |
| sitC | YP_217783.1 | iron transporter: fur regulated | Virulence | SPI-1 | Protein | 3e-35 | 42 |
| sitC | NP_461784.1 | permease | Virulence | SPI-1 | Protein | 3e-35 | 42 |
| sitC | NP_457257.1 | Iron transport protein, inner membrane component | Virulence | SPI-1 | Protein | 3e-35 | 42 |
| sitC | AAD41067.1 | SitC | Virulence | centisome 63 pathogenicity island | Protein | 2e-35 | 42 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| sitD | YP_003730224.1 | iron transport system membrane protein SitD | BAC0352 | Protein | 3e-77 | 71 |
| sitD | YP_003730224.1 | iron transport system membrane protein SitD | BAC0442 | Protein | 7e-60 | 57 |
| sitD | YP_003730224.1 | iron transport system membrane protein SitD | BAC0351 | Protein | 1e-35 | 42 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| sitD | YP_003730224.1 | iron transport system membrane protein SitD | VFG0528 | Protein | 3e-77 | 71 |
| sitD | YP_003730224.1 | iron transport system membrane protein SitD | VFG0527 | Protein | 1e-35 | 42 |
