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Name : HPB8_739 (HPB8_739) Accession : YP_003728760.1 Strain : Helicobacter pylori B8 Genome accession: NC_014256 Putative virulence/resistance : Unknown Product : regulator of nonsense transcripts 1 Function : - COG functional category : L : Replication, recombination and repair COG ID : COG1112 EC number : 3.6.1.- Position : 715093 - 715953 bp Length : 861 bp Strand : + Note : Regulator of nonsense transcripts 1 (ATP-dependent helicase RENT1) (Nonsense mRNA reducing factor 1) (NORF1) (Up-frameshift suppressor 1 homolog) (hUpf1) DNA sequence : TTGTGTAAAGGTTTGCTCTATAAACACATTTTAGAAGAGAGCGTTTTTGAAGTGTCGCCCATGTATGAGAATGCAATTGA TTGGAAAATAACCAAGTGTTTGTTTCATGGGATACAACTTTTACTGCCCATTGCATACAAGGAATTTAAACATAAAAAGT ACACACCAAGGGATACTCTCAAGGTGTGGGTAACAAATTATGACAGCTTGCTAAAAAGTGCATTCATTGCTGAAAAAGAG CCAGAACCCAAACACATGGATGTGATTATGCTCTTTAATGACCGACTGGGATCTCAAATTTTAAAATATGCTTATATTTT TAATGACTTCAATCTTAATTATTCCGTGTTAGATTATCAAAAGAATGGAGCAATCAAAAATACCAAGCAATTTTACGATC CTGAGAATATTATCCGTTGGATTAATGTTGAAAGAGAGCATAAACTAGAAAAAACAAGTAGCTATAACAAAAATCAAGTT CAAAAAATCATAGAGCTTTTAGAGCAAATCAATCGCATTCTTAATCAAAGAAAAATCAGAAAAACCATAGGAATTATCAC ACCTTATAATGCCCAAAAAAGATGCTTGCGATCAGAAGTGGAAAAATACGGCTTCAAGAATTTTGATGAGCTCAAAATAG ACACTGTGGATGCCTTTCAAGGCGAGAAGGCAGATATTATTATTTATTCCACCGTGAAAACTTATGGTAATCTTTCTTTC TTGATAGATTCTAAACGCTTGAATGTAGCTATTTCTAGGGCAAAAGAAAATCTCATTTTTGTGGGCAAAAAGTCTTTCTT TGAGAATTTGCGAAGCGATGAGAAGAATATCTTTAGCGCTATTTTGCAAGTCTGTAGATAG Protein sequence : MCKGLLYKHILEESVFEVSPMYENAIDWKITKCLFHGIQLLLPIAYKEFKHKKYTPRDTLKVWVTNYDSLLKSAFIAEKE PEPKHMDVIMLFNDRLGSQILKYAYIFNDFNLNYSVLDYQKNGAIKNTKQFYDPENIIRWINVEREHKLEKTSSYNKNQV QKIIELLEQINRILNQRKIRKTIGIITPYNAQKRCLRSEVEKYGFKNFDELKIDTVDAFQGEKADIIIYSTVKTYGNLSF LIDSKRLNVAISRAKENLIFVGKKSFFENLRSDEKNIFSAILQVCR |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| HPB8_739 | YP_003728760.1 | regulator of nonsense transcripts 1 | Not tested | cag PAI | Protein | 5e-131 | 100 |
