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Name : glnA (HPB8_728) Accession : YP_003728749.1 Strain : Helicobacter pylori B8 Genome accession: NC_014256 Putative virulence/resistance : Virulence Product : glutamine synthetase Function : - COG functional category : E : Amino acid transport and metabolism COG ID : COG0174 EC number : 6.3.1.2 Position : 704340 - 705785 bp Length : 1446 bp Strand : - Note : Glutamine synthetase 1 (Glutamine synthetase I) (Glutamate-ammonia ligase I) (GSI), Glutamine synthetase type I, Glutamine synthetase, catalytic domain, GlnA: glutamine synthetase, type I DNA sequence : ATGATAGTAAGAACTCAAAATAGTGAAAGCAAGATCAAAGAATTTTTTGAATTTTGCAAAGAAAATGAAGTGGAATTTGT GGATTTTAGATTCAGCGATATTAAAGGCACTTGGAATCACATCGCTTATTCTTTTGGGGCTTTAACGCATGGCATGCTTA AAGAGGGGATTCCTTTTGATGCGAGTTGTTTTAAAGGCTGGCAAGGCATTGAACACTCCGATATGATTTTAACCCCCGAT TTGGTGCGTTATTTCATTGACCCTTTTAGCGCGGATGTGAGTGCGGTCGTGTTTTGCGATGTGTATGATGTGTATAAAAA CCAGCCTTATGAAAAATGCCCCAGAAGTATCGCTAAAAAAGCCTTACAACATTTAAAAGATTCAGGTTTGGGCGATGTGG CTTATTTTGGCGCGGAGAATGAATTTTTTATCTTTGATTCCATTAAGATTAAAGACGCTTCCAATTCCCAATACTATGAA GTGGATAGCGAAGAGGGCGAATGGAATAGGGATAAAAGTTTTGAAAATGGCGTGAATTTTGGGCATAGACCGGGCAAGCA AGGAGGCTATTTGCCTGTACCGCCAACGGATACGATGATGGATATTCGCACTGAAATTGTGAAAGTCTTAAACCAAGTGG GGCTAGAAACTTTTGTCGTCCATCATGAAGTCGCGCAAGCGCAAGGCGAAGTGGGCGTGAAATTTGGGGATTTAGTGGAA GCCGCTGATAATGTCCAAAAACTCAAATATGTGGTTAAAATGGTCGCTCATTTAAACGGGAAAACCGCCACTTTCATGCC AAAACCTTTATATGGGGATAACGGGAGCGGGATGCACACCCATGTGAGCGTTTGGAAAAACAACGAAAACCTTTTTAGCG GCGAAACTTACAAGGGCTTGAGTGAGTTGGCGTTGCATTTTTTAGGGGGCGTGTTGCGCCACGCTAGAGGGTTGGCCGCT TTCACTAACGCTTCCACTAATTCTTACAAACGCCTGATTCCGGGATATGAAGCCCCATCTATTTTAACTTATTCGGCTAA TAACAGGAGCGCGAGCGTGCGTATCCCTTATGGGATTTCTAAAAATAGTGCTAGGTTTGAATTCAGGTTTCCTGACAGCT CATCAAACCCTTACTTGGCTTTTGGGGCGATTTTAATGGCAGGCATGGATGGTGTTAAAAATAAGATTGATCCCGGCGAG GCGATGGATATCAACCTTTTCAAATTGACTTTAGATGAAATTAGGGAAAAAGGTATCAAACAAATGCCCCACACTTTAAG GCGGTCGTTAGAAGAAATGTTGGCCGATAAGCAGTATTTGAAAGAAGGTCAGGTCTTTAGCGAAGAATTTATTCAAGCTT ATCAGTCTCTTAAATTCAACGCTGAAGTGTTCCCATGGGAGAGCAAGCCCCATCCCTTTGAATTTATCACCACTTATTCA TGCTAA Protein sequence : MIVRTQNSESKIKEFFEFCKENEVEFVDFRFSDIKGTWNHIAYSFGALTHGMLKEGIPFDASCFKGWQGIEHSDMILTPD LVRYFIDPFSADVSAVVFCDVYDVYKNQPYEKCPRSIAKKALQHLKDSGLGDVAYFGAENEFFIFDSIKIKDASNSQYYE VDSEEGEWNRDKSFENGVNFGHRPGKQGGYLPVPPTDTMMDIRTEIVKVLNQVGLETFVVHHEVAQAQGEVGVKFGDLVE AADNVQKLKYVVKMVAHLNGKTATFMPKPLYGDNGSGMHTHVSVWKNNENLFSGETYKGLSELALHFLGGVLRHARGLAA FTNASTNSYKRLIPGYEAPSILTYSANNRSASVRIPYGISKNSARFEFRFPDSSSNPYLAFGAILMAGMDGVKNKIDPGE AMDINLFKLTLDEIREKGIKQMPHTLRRSLEEMLADKQYLKEGQVFSEEFIQAYQSLKFNAEVFPWESKPHPFEFITTYS C |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| glnA | YP_003728749.1 | glutamine synthetase | Not tested | cag PAI | Protein | 0.0 | 100 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| glnA | YP_003728749.1 | glutamine synthetase | VFG1399 | Protein | 3e-89 | 45 |
