Gene Information

Name : cagQ (HPB8_709)
Accession : YP_003728730.1
Strain : Helicobacter pylori B8
Genome accession: NC_014256
Putative virulence/resistance : Virulence
Product : cag pathogenicity island protein Q
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 682562 - 682942 bp
Length : 381 bp
Strand : +
Note : -

DNA sequence : 
ATGCTTCCTACTAAAACACGCATTAGAGATCCGAACAAGCAAGAACTTACACAACCAAAAATAAAAGGATTGAGTATGGG
AAAAATTTTAGCTTCTTTGTTGGGTGGCGGAACAAATCTTTTTACAGGTTTATCCAGTGATTTGTTTTCTATGATATTAA
ATTTTTTGTTCTTCCTGATGTTAATGATGGGACTTAATGAAGCATTAGGGAAAAAATTTAACTTGCCTATGGACAATATC
AAGAATTTTATGGCAGAAGTGCTGAAGAATGGATTCGATAGTATCAAAAACATGGGATCTGCTTTGGTTAGTAATGGTTT
TGATAGCAACAAATCAGACAAAACCACTAATAAAATGAGTGTCCCACAAGTAAGACTCTAG

Protein sequence : 
MLPTKTRIRDPNKQELTQPKIKGLSMGKILASLLGGGTNLFTGLSSDLFSMILNFLFFLMLMMGLNEALGKKFNLPMDNI
KNFMAEVLKNGFDSIKNMGSALVSNGFDSNKSDKTTNKMSVPQVRL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
cagQ YP_003728730.1 cag pathogenicity island protein Q Virulence cag PAI Protein 6e-32 100
cagQ NP_223201.1 cag island protein Virulence cag PAI Protein 2e-31 98
HP0535 BAD13868.1 cag pathogenicity island protein Virulence cag PAI Protein 5e-31 97
HP0535 NP_207331.1 cag pathogenicity island protein (cag14) Virulence cag PAI Protein 2e-30 97
HP0535 BAD14033.1 cag pathogenicity island protein Virulence cag PAI Protein 2e-30 96
cagQ AAC44691.1 CagQ Virulence cag PAI Protein 2e-30 96
cag14 AAR03897.1 Cag14 Virulence cag PAI Protein 2e-30 96
cag14 AAR03958.1 Cag14 Virulence cag PAI Protein 2e-30 96
cag14 AAR03927.1 Cag14 Virulence cag PAI Protein 6e-31 96
cag14 AAR03869.1 Cag14 Virulence cag PAI Protein 4e-30 95
HP0535 BAD13951.1 cag pathogenicity island protein Virulence cag PAI Protein 8e-27 85

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
cagQ YP_003728730.1 cag pathogenicity island protein Q VFG0294 Protein 6e-31 97