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Name : xerD (HPB8_556) Accession : YP_003728577.1 Strain : Helicobacter pylori B8 Genome accession: NC_014256 Putative virulence/resistance : Unknown Product : XerCD family integrase/recombinase Function : - COG functional category : L : Replication, recombination and repair COG ID : COG4974 EC number : - Position : 527584 - 528657 bp Length : 1074 bp Strand : - Note : - DNA sequence : ATGAGTGATTGTAAAATGAATAGGGTTAGTAGGAAATTGTTTGATAATATTAAGTCATTTTTGCACTATAAGCTTAAAAC AATGATACGCATTCAAAGCGTGAATGATTTACAATTGGTCTTAAAATGGCAAGATAGAGTTTTAGAGTGCCAAAGTCTTA TCGCATTGAAAGAACTCAATCGCAAGCTTTATAATCAAGGCGTTAGGCATACGATTATGATGCAAGGCTTGTTTTTGTTC TTTGAATATTTTGATAATAGGATTAAGCTCAAATCCTTGCACAATCTGGCAGAAGAACAGGTTATAGACTTCTTATTTGG ATTAACCAAAAACAGGAAGCCAAGCTCTATGGCTAAATATGTGATGTATTTAAGACAATTCTTTGATTATTTGGACAGAA AAAGAAACTATAGCTTTGAATTTGAACTTAAAAATCTATCGTTTGCCAAGAAAGAAACGCATTTGCCTAAACATTTGAAT AAAAATGATTTTAAGGCTTTTGTCCAAGCTCTTCTAAAATACCATCCCAAAACCAGTTTTGAAAAACGCAATCAGTGTAT TTTACTGCTTATCGTATTAGGGGGATTAAGGAAGTTTGAAGCCTTAGATTTGGAGCTAAAAAACATTGCTTTAGAAAATA ACCACTACCGCCTTTTAATCAAAGGCAAAAACAACAAAGAGAGATACGCTTATATTGAAAAAGAGTTTTTGCAAGTTCCT TTGAATGCGTGGCTAAGCGATACTAAACGATTAAAGAGTTTTAAGGGGCGTTTTGTGTTTAAGAAAGCAAAAAACAACAC CACACAAAAAACTTGCTCTTTAAAGGGCTTTATCGCTAAAATTTTTAAGCTCTCTAATATTGATGTAAAATCTTATGGAT TAGGTTTGCATCTTTTTAGGCATAGTTTTGCTACTTTTATTTATGATGCAACACAGGATTTGGTTTTAACTTCAAGAGCG TTAGGGCATAGTTCTTTGCTTTCTACTAAAATCTATATCCATACCACTCAAGAACACAATAAAAAAGTGGCTCTTGTGTT AGGGGGGTTATTAAGAAATGAAAAAAGCGAGTAG Protein sequence : MSDCKMNRVSRKLFDNIKSFLHYKLKTMIRIQSVNDLQLVLKWQDRVLECQSLIALKELNRKLYNQGVRHTIMMQGLFLF FEYFDNRIKLKSLHNLAEEQVIDFLFGLTKNRKPSSMAKYVMYLRQFFDYLDRKRNYSFEFELKNLSFAKKETHLPKHLN KNDFKAFVQALLKYHPKTSFEKRNQCILLLIVLGGLRKFEALDLELKNIALENNHYRLLIKGKNNKERYAYIEKEFLQVP LNAWLSDTKRLKSFKGRFVFKKAKNNTTQKTCSLKGFIAKIFKLSNIDVKSYGLGLHLFRHSFATFIYDATQDLVLTSRA LGHSSLLSTKIYIHTTQEHNKKVALVLGGLLRNEKSE |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| HPP12_0437 | YP_002301073.1 | integrase/recombinase XercD family | Not tested | cag PAI | Protein | 9e-156 | 97 |
