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Name : HPB8_521 (HPB8_521) Accession : YP_003728542.1 Strain : Helicobacter pylori B8 Genome accession: NC_014256 Putative virulence/resistance : Unknown Product : hypothetical protein Function : - COG functional category : L : Replication, recombination and repair COG ID : COG4974 EC number : - Position : 493327 - 494394 bp Length : 1068 bp Strand : + Note : Designated XerCD-family integrase/recombinase in other H. pylori strains but neither KEGG orthology nor sequence similarity support this DNA sequence : ATGCCACATAACAAACTCACTAAATCTCAGAGAGAACTCTTTTGTAATCTCAAAGCCTTTTTATACACTAAGGCTAAAAA CTTTACGCCCATTCAAGATGTGAAGGATATGGCTTTAATCCTAGACACACAAGATAAAATCTTAAAATGTCATAATATAG AGCAATTAAAACAACTCTGTCATATTCTTTATAATCAAGGCATTAAACACACTATAATGATGCAAGGCTTGTTTTTATTC TTTAACTATTTTAAAGATAATCTCAAATTAAGAAGTTTTAGAATGCTTAGCGAAGAGCAAGTGATTAACTTTCTCTTTGA ACTCGCTCAAAATAGAAAAACCAGCTCTATGGCTAAGTATGTGATGTATTTAAGACAATTCTTTGATTATTTGGATAGAA AAAGGCGTTATAGCTTTGATTTTACGCTTAAAAACCTAGCCTTTGCTAAGACCAAAGAAAGCTTACCCAGACATTTAAAC GATAAAGACTTAAAGAGTTTTTTAAAAACACTCTTAGGCTATAAGCCAGCTACAAGCTTTGAAAAACGCAATAAGTGTAT TCTACTTATTGTAATACTTGGGGGACTTAGAAAATGCGAAGTGTTAAACATAGAATTAAAACACATTCAAGTAGAAGAGC AAAACTACTCTATTTTAATTCAAGGTAAAGGTAGAAAAGAGAGAAAAGCTTATATTAAAAAGAGTTTGTTAGAACCAAGC TTGAATGCTTGGCTTAGTGATGAATATAGACTAAAATATTTTAATGGGGCATATCTTTTTAAAAAAGACAAACAAAAAGC ACAAAATTCTTTAACGCTTTATAACTTTATCCCCTTAATCTTTAAACTAGCTCAAATCAAACACTATAAGCAATATGGCA CAGGCTTACATCTATTTAGGCATAGTTTTGCAACACTCATTTATCAAGAAACCCAAGACTTAGTTTTAACTTCAAGGGCG TTAGGGCATAGCTCCTTACTCTCTACTAAGATTTATATTCATACCACACAAGAGCATAACAAGAAAGTGGCTCTTGTGTT TGATAGTTTGATAGAGAACAAGAAGTAA Protein sequence : MPHNKLTKSQRELFCNLKAFLYTKAKNFTPIQDVKDMALILDTQDKILKCHNIEQLKQLCHILYNQGIKHTIMMQGLFLF FNYFKDNLKLRSFRMLSEEQVINFLFELAQNRKTSSMAKYVMYLRQFFDYLDRKRRYSFDFTLKNLAFAKTKESLPRHLN DKDLKSFLKTLLGYKPATSFEKRNKCILLIVILGGLRKCEVLNIELKHIQVEEQNYSILIQGKGRKERKAYIKKSLLEPS LNAWLSDEYRLKYFNGAYLFKKDKQKAQNSLTLYNFIPLIFKLAQIKHYKQYGTGLHLFRHSFATLIYQETQDLVLTSRA LGHSSLLSTKIYIHTTQEHNKKVALVFDSLIENKK |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| HPP12_0437 | YP_002301073.1 | integrase/recombinase XercD family | Not tested | cag PAI | Protein | 5e-100 | 63 |
