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Name : serS (HPB8_50) Accession : YP_003728071.1 Strain : Helicobacter pylori B8 Genome accession: NC_014256 Putative virulence/resistance : Unknown Product : seryl-tRNA synthetase Function : - COG functional category : J : Translation, ribosomal structure and biogenesis COG ID : COG0172 EC number : 6.1.1.11 Position : 54616 - 55863 bp Length : 1248 bp Strand : + Note : [KO:K01875], synonyms: seryl-tRNA(Ser/Sec) synthetase, Serine-tRNA ligase, SerRS DNA sequence : ATGATTGATAGAAAACTTTTATTGCAAGATTTTGAGATGGTGGCTCTTTCTTTAAAAAAGCGTAATAGTGCGATGGATGA TGGATTGGAGCGTTTGCGCGAAGTCATCACGCGTTATAAAAAGCAACTCATTGAATTAGAAGGCTTGCAAGCCTTTCAAA ACAAGGTTTCTAAAGAATTTGGTATCAAAATGGCTCAAAAAGCGGATGCAAGCGATCTCAAAAAAGAGCTAGAAAACAAT AAAATCAAACTGAATGAGCTTTCCAAAAGCGTAGGCGAATTGGAGCAACAAATTGATTTAAAGCTTTCCATAATCCCTAA TCTGGTGGATGAAAAAACCCCTTTAGGCGCAAGCGAAGAGGACAACATAGAAATTAAAAAAATCTTAACCCCTAGAAATT TCACTTTCAAACCCAAAGAGCATTTTGAACTCGCTCAACAAAATGGCTGGATTGATTTTGAAAGCGGCGTGAAACTCGCC AAAAGCCGTTTTTCTGTCATCAGGGGTTTTGGGGCTAAAATTTATCGCGCGCTCATTCATTTGATGTTGGATTTTAATGA AAAAAATGGCTTTGAAATCATCTACACGCCGGCGTTAGTGAATGAAAAAATGCTTTTTGGGACCGGGCAATTACCCAAAT TCAAAGAAGATGTTTTCAAAATAGAAAATGAAAATTTGTATCTGATCCCCACCGCTGAAGTAACGCTCACTAATCTCTAC AACGACACGATCATTAGCGTTGAAAATCTCCCCATTAAAATGACCGCGCACACGCCTTGTTTTAGGAGCGAAGCAGGGAG TGCGGGCAAGGACACAAGGGGGATGATAAGACAGCACCAATTTGATAAAGTAGAATTAGTGGCTATCACGCACCCTAAAG AAAGCGATGTTATGCAAGAATATATGCTAGAGAGCGCGAGCGAAATTTTAAAGGCTTTGGAATTGCCGCACCGGTTCGTG CAATTGTGCAGTGGGGATTTAGGCTTTAGTGCGAGCAACACGATAGACATTGAAGTGTGGCTGCCTGGGCAAAATTGCTA CAGAGAAATCAGCTCCGTGTCTAACACGAGGGATTTCCAAGCCAGGCGCGCCAAAATCCGCTTCAAAGAAAATCAAAAAA ACCAATTAGCGCACACCTTAAACGGCTCTTCTTTAGCGGTAGGCAGGACGATGGTCGCTTTAATGGAAAACCACCAGCAA GCGGATGGGAGCATTCACATTCCTAAGGCGTTAGAAAAATACCTTTAA Protein sequence : MIDRKLLLQDFEMVALSLKKRNSAMDDGLERLREVITRYKKQLIELEGLQAFQNKVSKEFGIKMAQKADASDLKKELENN KIKLNELSKSVGELEQQIDLKLSIIPNLVDEKTPLGASEEDNIEIKKILTPRNFTFKPKEHFELAQQNGWIDFESGVKLA KSRFSVIRGFGAKIYRALIHLMLDFNEKNGFEIIYTPALVNEKMLFGTGQLPKFKEDVFKIENENLYLIPTAEVTLTNLY NDTIISVENLPIKMTAHTPCFRSEAGSAGKDTRGMIRQHQFDKVELVAITHPKESDVMQEYMLESASEILKALELPHRFV QLCSGDLGFSASNTIDIEVWLPGQNCYREISSVSNTRDFQARRAKIRFKENQKNQLAHTLNGSSLAVGRTMVALMENHQQ ADGSIHIPKALEKYL |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| serS | YP_003446791.1 | seryl-tRNA synthetase | Not tested | The aminoglycoside resistance gene cluster | Protein | 2e-77 | 46 |
