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Name : tktA (HPB8_1207) Accession : YP_003729228.1 Strain : Helicobacter pylori B8 Genome accession: NC_014256 Putative virulence/resistance : Unknown Product : transketolase Function : - COG functional category : G : Carbohydrate transport and metabolism COG ID : COG0021 EC number : 2.2.1.1 Position : 1178262 - 1180187 bp Length : 1926 bp Strand : + Note : [KO:K00615] DNA sequence : ATGCGATTGAGTAACGCTGACTTAGAACGATTAAAAAGCATGGCGAACACGCTTCGTTTTTTATGTGCAGACATGATAGA TAAGGCTAATAGCGGGCATCCGGGCGTGTGCTTGGGATTAGCCGATGTGATGGTGGTTTTAAGCTTGCACCTAAACCTTA ACCCCATTAACCCTAAATGGCTCAATAGGGACAGGTTGGTTTTTAGCGGAGGGCATGCGAGCGCGTTAGCGTATAGTTTG TTGCATTTGTGGGGCTTTGATTTGAGTTTAGAAGATTTAAAGCATTTTAGGCAATTACACTCTAAAACCCCAGGACACCC CGAATTGCACCACACCGAAGGCATTGAAATCACCACAGGCCCTTTGGGGCAAGGTTTTGCTAACGCTGTGGGCTTTAGCA TGGCGAGCCAATACGCTCAAAACCTTTTGGATAAAGAAGTGATTTCTCATAAAGTCTATTGCTTGTGTGGGGATGGGGAT TTGCAAGAAGGCATTAGTTATGAGAGCGCTTCTTTAGCCGGGCACCTTCGCCTTGATAACCTCATTGTGATTTATGACAG CAATCAGATCAGCATTGAAGGCGCTATTAATATTAGTTTTAGCGAACAGGTCAAAACGCGTTTTTTAGCGCAAAATTGGG AAGTGCTAGAATGCGATGGGCATGACTATCAAGCGATTCACAATGCTTTAGAAGAAGCCAAAAAATCCCATAAACCCACG CTTTTAATCGCTCATACGATTATTGGTAAGGGGGCTGTTGGTTTAGAGGGGAGTGAAAAAACGCATGGCTCGCCTTTAAA TAAAGAAGTGTTAAAACAATCCAAAGAAAACGCTCAAATCAATCCTGATGAAAGCTTTATCATTAGCCCAAAAAACAAAA TGCATTTTGAAGAAGTGAAAGTTAGAGGCGCTAGTTTAGAAGCCTTATGGGAAAAATCCTTAAGCCCTAAAACAAAAGAA AAAATCCATGCGTTAAAGGATTTTGATTTTAGCACCATCCATTACCCCACCTTTAAAAAAGGCGAATCTTTAGCCACGAG AGTGAGTAACGGCATGATTTTAAACGCTATCGCTAAAGAATGCGAAGGCTTTTTAGGGGGGAGCGCGGATCTAGCCCCCT CTAACAACACGCAGTTAAAACACTCTGGCGATTTCCCTTTAGGGCAAAACTTGCATTTTGGGATCAGAGAGCATGCCATG GGGGCTATCACTAACGCTTTAGCGGCGTATGGCTTGTTTTTGCCTTTTTGCGCGACCTTTTTTGTGTTTAGCGATTATTT AATGCCCAGCATGCGTTTGAGCGCTTTAATGAAATTAAAAGCCCTTTTTATCTTTACGCATGACAGCATTGGCGTGGGCG AAGACGGAGCGACGCACCAACCCATAGAGCAATTGAGCCATTTACGCGCTTTGCCTAATTTCTATGCTTTCAGGCCCAGC GATGCTTTTGAAAATAAGGCTTGCATGCAAGTGGCGTTAAGTTTGAACGCCCCTAGCGGGCTTATTTTATCGCGCCAGAA TTTACCCGTGCTTGATGAGGTTTCTAAAGAGCGGGTTTTAAAAGGGGCGTATGTTAAATATGATGCTAAAGATCCCATTA TCACGCTCGTTGCGAGCGGGAGCGAAATCTCTTTGGCTTTAGAGAGCGCTAAAATGTTAGAGCGAGAAAATATCCCCACT CAAGTGGTGAGCGCGCCATGCTTTGATTTGTTGATAGAGCAAGATGAAAGCTATCTTAAAGAACTCTTTAAGGGTAAAGT TTTAGTCATTGAAGCGAGTCGCGCGATAGAGTGGTATCGTTTTGCGGATAAAATCATTGGCATGGATTCTTTTGGGAGCT CAGCAAAGGGCGATAAACTCTTTGAAAAATTCGGCTTCAGCGTTGAAAACATCACCGCTCAAGCTAAAAGGTTGCTCAAC GCATGA Protein sequence : MRLSNADLERLKSMANTLRFLCADMIDKANSGHPGVCLGLADVMVVLSLHLNLNPINPKWLNRDRLVFSGGHASALAYSL LHLWGFDLSLEDLKHFRQLHSKTPGHPELHHTEGIEITTGPLGQGFANAVGFSMASQYAQNLLDKEVISHKVYCLCGDGD LQEGISYESASLAGHLRLDNLIVIYDSNQISIEGAINISFSEQVKTRFLAQNWEVLECDGHDYQAIHNALEEAKKSHKPT LLIAHTIIGKGAVGLEGSEKTHGSPLNKEVLKQSKENAQINPDESFIISPKNKMHFEEVKVRGASLEALWEKSLSPKTKE KIHALKDFDFSTIHYPTFKKGESLATRVSNGMILNAIAKECEGFLGGSADLAPSNNTQLKHSGDFPLGQNLHFGIREHAM GAITNALAAYGLFLPFCATFFVFSDYLMPSMRLSALMKLKALFIFTHDSIGVGEDGATHQPIEQLSHLRALPNFYAFRPS DAFENKACMQVALSLNAPSGLILSRQNLPVLDEVSKERVLKGAYVKYDAKDPIITLVASGSEISLALESAKMLERENIPT QVVSAPCFDLLIEQDESYLKELFKGKVLVIEASRAIEWYRFADKIIGMDSFGSSAKGDKLFEKFGFSVENITAQAKRLLN A |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| tktA | AAO17218.1 | TktA | Not tested | tcd island | Protein | 1e-96 | 42 |
| APECO1_2641 | YP_859417.1 | transketolase | Not tested | Not named | Protein | 1e-87 | 41 |
