Gene Information

Name : HMPREF0837_11892 (HMPREF0837_11892)
Accession : YP_003725334.1
Strain : Streptococcus pneumoniae TCH8431/19A
Genome accession: NC_014251
Putative virulence/resistance : Resistance
Product : metal cation ABC transporter membrane protein
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG1108
EC number : -
Position : 1730591 - 1731439 bp
Length : 849 bp
Strand : +
Note : COG: COG1108; Pfam: PF00950; InterPro: IPR001626

DNA sequence : 
ATGATTGCAGAATTTATCGATGGATTGCAAAAATTCCATTTCCTACAAAATGCCTTGATAACAGCTATTGTCGTCGGGAT
TGTAGCTGGAGCCGTGGGATGTTTCATTATTCTACGCGGGATGTCACTCATGGGAGATGCCATTTCACATGCTGTCTTAC
CAGGTGTAGCCCTCTCCTTCATCTTGGGCCTTGACTTCTTTATCGGAGCCATTGTCTTTGGATTGCTAGCTGCCATCATC
ATTACCTACATCAAAGGAAACTCGATTATCAAAAGCGATACCGCCATCGGCATTACCTTTTCTTCTTTCTTAGCCCTCGG
TATCATCTTGATTGGTGTCGCTAAAAGTTCAACTGACCTTTTCCATATCCTTTTTGGTAATATTCTGGCCGTCCAAGATA
CGGATATGTTTATTACTATGGGTGTGGGGGCAGCCATCCTCTTGTTAATCTGGATTTTCTTCAAGCAACTCTTGATAACT
TCCTTTGATGAACTCTTGGCTAAAGCCATGGGAATGCCTGTCAATTTCTATCACTACCTTCTCATGGTACTCCTGACTCT
CGTGTCTGTGACAGCCATGCAAAGTGTCGGAACTATCCTGATTGTAGCCATGCTGATTACCCCAGCTGCAACTGCTTATC
TGTATGCTAATAGTCTGAAAAGCATGATTTTCCTTTCCTCAACCTTCGGAGCTACTGCTTCAGTTTTGGGACTCTTTATT
GGCTATAGTTTTAATGTTGCGGCAGGTTCTAGTATCGTGCTTACAGCTGCTAGTTTCTTTCTCATTAGCTTCTTTATCGC
TCCCAAACAACGATATTTGAAACTGAAAAATAAACATTTGTTAAAATAA

Protein sequence : 
MIAEFIDGLQKFHFLQNALITAIVVGIVAGAVGCFIILRGMSLMGDAISHAVLPGVALSFILGLDFFIGAIVFGLLAAII
ITYIKGNSIIKSDTAIGITFSSFLALGIILIGVAKSSTDLFHILFGNILAVQDTDMFITMGVGAAILLLIWIFFKQLLIT
SFDELLAKAMGMPVNFYHYLLMVLLTLVSVTAMQSVGTILIVAMLITPAATAYLYANSLKSMIFLSSTFGATASVLGLFI
GYSFNVAAGSSIVLTAASFFLISFFIAPKQRYLKLKNKHLLK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
EF0576 NP_814341.1 cation ABC transporter permease Not tested Not named Protein 7e-82 79
ef0094 AAM75297.1 EF0094 Not tested Not named Protein 5e-82 79

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
HMPREF0837_11892 YP_003725334.1 metal cation ABC transporter membrane protein BAC0442 Protein 5e-34 41