Gene Information

Name : HMPREF0837_11891 (HMPREF0837_11891)
Accession : YP_003725333.1
Strain : Streptococcus pneumoniae TCH8431/19A
Genome accession: NC_014251
Putative virulence/resistance : Resistance
Product : ABC transporter ATP-binding protein
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG1121
EC number : 3.6.3.-
Position : 1729839 - 1730594 bp
Length : 756 bp
Strand : +
Note : COG: COG1121; Pfam: PF00005; InterPro: IPR003439

DNA sequence :
ATGTATATTAAGAGACAGGAGGAATACAAGTTTATGATACGTATCGAAAACCTCAGTGTCTCCTACAAAGAAACGTTGGC
ACTTAAGGATATTTCACTAGTGCTCCATGGACCAACAATTACCGGCATCATTGGTCCAAACGGCGCTGGGAAATCAACAC
TATTAAAAGGTATGCTGGGAATTATCCCACATCAAGGTCAGGCATTTCTCGATGACAAGGAAGTTAAAAAATCCTTACAC
CGAATTGCCTATGTCGAACAAAAAATCAATATCGACTACAACTTTCCCATCAAGGTCAAGGAATGCGTCTCGTTAGGACT
ATTTCCCTCTATTCCTCTCTTTCGAAGTTTAAAGGCTAAACATTGGAAGAAAGTGCAAGAGGCCCTTGAAATCGTCGGCC
TAGCTGACTACGCTGAACGTCAAATTAGTCAACTGTCTGGAGGTCAATTCCAGCGGGTCTTGATTGCCAGATGTTTGGTG
CAGGAAGCCGACTATATCCTCTTGGATGAACCCTTTGCTGGGATTGACTCTGTCAGTGAGGAAATCATCATGAATACGCT
GAGAGATTTGAAAAAAGCTGGGAAGACGGTTCTCATCGTTCACCACGACCTCAGCAAGATTCCCCACTACTTCGATCAAG
TCTTACTTGTCAATCGAGAAGTGATTGCCTTTGGTCCAACAAAAGAAACTTTTACCGAAACCAATCTAAAAGAAGCTTAC
GGTAATCAACTCTTTTTCAATGGAGGTGACCTATGA

Protein sequence :
MYIKRQEEYKFMIRIENLSVSYKETLALKDISLVLHGPTITGIIGPNGAGKSTLLKGMLGIIPHQGQAFLDDKEVKKSLH
RIAYVEQKINIDYNFPIKVKECVSLGLFPSIPLFRSLKAKHWKKVQEALEIVGLADYAERQISQLSGGQFQRVLIARCLV
QEADYILLDEPFAGIDSVSEEIIMNTLRDLKKAGKTVLIVHHDLSKIPHYFDQVLLVNREVIAFGPTKETFTETNLKEAY
GNQLFFNGGDL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
EF0575 NP_814340.1 cationic ABC transporter ATP-binding protein Not tested Not named Protein 2e-67 57
ef0093 AAM75296.1 EF0093 Not tested Not named Protein 2e-67 57

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
HMPREF0837_11891 YP_003725333.1 ABC transporter ATP-binding protein BAC0400 Protein 3e-39 42