Gene Information

Name : HMPREF0837_11678 (HMPREF0837_11678)
Accession : YP_003725120.1
Strain : Streptococcus pneumoniae TCH8431/19A
Genome accession: NC_014251
Putative virulence/resistance : Unknown
Product : DNA integrase
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG2801
EC number : -
Position : 1542098 - 1542931 bp
Length : 834 bp
Strand : -
Note : COG: COG2801; Pfam: PF00665; InterPro: IPR001584

DNA sequence :
ATGACTGAGTTTTCGTTAGTTCTTCTTCTAAAATCCATTAAACTAGCTCGTTGGACCTACTACTATCACTTGAAACAGCT
AGACAAAACAGATAAGGACCAAGAGCTTAAAGCTGAAATTCAATCCATTTTTATCGAACACAAGGGAAATTATGCTTATC
GTCGGATTTATTTAGAACTAAGAAATCGTGCTTATCTGGTAAATCATAAAAGAGTTCAAGGCTTGATGAAAGTACTCAAT
TTACAAGCTAAAATGCGACAGAAACGAAAATATTCTTCTCATAAAGGAGACGTTGGCAAGAAGGCAGAGAATCTCATTCA
AGGCCAATTTGAAGGCTCTAAAACAATGGAAAAGTGCTATACAGATGTGACAGAATTTGCCATTCCAGCAAGTACTCAAA
AGCTTTACTTATCACCAGTTTTAGATGGCTTTAACAGCGAAATTATTGCTTTTAATCTTTCTTGTTCGCCTAATTTAGAA
CAAGTACAAACAATGTTGGAACAGGCATTCACAGAGAAGCACTACGAAAATACGATTCTCCATAGTGACCAAGGCTGGCA
ATACCAACACGATTCTTATCATCAGTTTCTTGAGGGTAAGGGAATTCAAGCATCCATGTCACGTAAGGGAAACAGCCAAG
ACAACGGTATGATGGAGTCCTTCTTTGGGATTCTGAAATCGGAAATGTTTTACGGTTATGAGAAGTCGTTTCAGTCGCTT
AAGCAATTGGAACAAGCCATTGTAGACTATATTGATTACTACAACAATAAACGAATTAAGGTAAAACTAAAAGGACTTAG
CCCTGTGCAATACAGAACTAAATCCTTCGGATAA

Protein sequence :
MTEFSLVLLLKSIKLARWTYYYHLKQLDKTDKDQELKAEIQSIFIEHKGNYAYRRIYLELRNRAYLVNHKRVQGLMKVLN
LQAKMRQKRKYSSHKGDVGKKAENLIQGQFEGSKTMEKCYTDVTEFAIPASTQKLYLSPVLDGFNSEIIAFNLSCSPNLE
QVQTMLEQAFTEKHYENTILHSDQGWQYQHDSYHQFLEGKGIQASMSRKGNSQDNGMMESFFGILKSEMFYGYEKSFQSL
KQLEQAIVDYIDYYNNKRIKVKLKGLSPVQYRTKSFG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SEQ_0791 YP_002746129.1 transposase Not tested ¥ÕSeq2 Protein 1e-92 73
SEQ_1760 YP_002746996.1 transposase Not tested ¥ÕSeq3 Protein 1e-92 72
EFAU085_00737 YP_008394261.1 ISEnfa3, transposase Not tested Not named Protein 2e-52 48
APECO1_1088 YP_853108.1 transposase subunit Not tested PAI IV APEC-O1 Protein 1e-58 46
CDBH8_0905 YP_005159997.1 transposase-like protein Not tested Not named Protein 2e-39 42
CDCE8392_1982 YP_005134513.1 transposase-like protein Not tested Not named Protein 2e-39 42