Gene Information

Name : Aazo_1971 (Aazo_1971)
Accession : YP_003721172.1
Strain : Nostoc azollae 0708
Genome accession: NC_014248
Putative virulence/resistance : Virulence
Product : type II secretion system protein E
Function : -
COG functional category : N : Cell motility
COG ID : COG2804
EC number : -
Position : 2051434 - 2053446 bp
Length : 2013 bp
Strand : -
Note : PFAM: type II secretion system protein E; General secretory system II protein E domain protein; KEGG: ana:all2444 general secretion pathway protein E

DNA sequence :
ATGACTTACTCGTCACCACAACGGACTAGCACCGCGTTAACTACAAAAACACAGTTTTCGCCCTTTGGCAACCACCTAGT
GCAATCTGGCTATGTCAACACTGAACAGATGAAACAGGCACTAATAGAGAGCCGGAAATCTGGCAAGAAGCTGATAGATG
TCCTAGAGTTAATTACTGGGCAACAACTATCAGCAGAGTTTATTCGGGAACACAAGAAACAACATCTATTTGAACTAAAA
ATATTATATGGCGTTGAATCAGTAGATCCAGAAGTCAATCAAATTGGCAATCTGATGGTTGGACAATTGATTGATAGTCT
GATACCAGTCGATGTCTGTCGTCGTCATCGTTTGGTACCGCTATGGAAACGGGAAGACCAAATACCACCTTATGTTTTAG
TGGCAATGGTGGAACCAGATAATCTGGATGCTTCTGATGACCTGAACCGAATCTTGCGTAACAAAAACTTATCCTTACAG
CGGATGGTGATTACCCAAGAAGATTACCAGCATCTCATCAACAAATATTTAGATGAGTTGGCTATTCGGGAAAAGGAAAA
AGAACAAAAAAGAGATACTGATATTAATCAGGATATAAAATATCTGGAAGATCAGGATATAGAAGAATTTGGTGAGGACA
AGGATGCTGATATCAATGCATCAATTAAGGATGCTGAAGATGCACCCATTATCAAACTCGTCAACAGAATCCTGTTTAAA
GCTTTGCAAGAAAAGGTTTCGGATATTCATATCGAACCACAAGAGGAAAACTTACGCATTCGCTTCCGTAAGGATGGGGT
ACTGCATGAGGCTTTTGACCCTGTACCTAAAAAAATCATTCCGGCGGTGACAGCCCGATTTAAAATCATTTCCAATCTTG
ACATCGCGGAAAGGCGTTTACCTCAAGATGGACGCATCCGTCGTTTATTTGAAGGACGGAAAGTTGACTTCCGGGTGAAT
ACCTTACCCAGTCGCTATGGGGAAAAGGTGGTGTTACGGATTCTGGACAACTCTTCTACCCAACTAGGGTTGAATAAGTT
AATTACTGATCCAGAGACTTTGCATATTGTCCAGGATATCGTCAGCAAGCCCTTTGGCTTGATTTTGGTAACTGGTCCGA
CTGGTTCTGGTAAAACGACTTCGTTGTATTCGGCATTGGCAGAAAAGAACGATCCAGGAATTAACATTAGTACGGTAGAA
GACCCGATTGAATATAGTTTGCCAGGGATTACCCAAGTACAGGTAATTCGGGAAAAAGGGTTGGATTTTTCCACAGCATT
GCGGGCGTTCTTGCGTCAAGATCCCGATGTGTTGCTTGTGGGTGAAACACGGGATAAAGAAACGGCAAAAACAGCGATTG
AAGCGGCTTTAACAGGTCACTTAGTATTAACTACCTTACACACTAATGATGCGCCTGGTGCGATCGCACGTCTAGGAGAA
ATGGGAATTGAACCCTTCATGGTTTCCAGTTCCCTAATTGGTGTTTTGGCACAACGTTTAGTGCGTCGAGTTTGTTCACA
ATGTCGAATTCCCTACACTCCCACTACTGAAGAACTGGCTCGTTATGGTCTGTCAGCATCCAAAGAAACATCAGTAACTT
TTTACAAGGCTAATTCCTTACCTCCAGAATCTATAGCAGAAGCTAAAACCAAAAATGAAATCTGTGGGGCTTGTAATGGC
ATTGGGTATAAAGGACGTTGTGGTGTTTATGAAGTTATGCGAGTCACAGAAAACCTCCAAACTCTCATCAACCAAGAAGC
ACCCACAGAACGCATTAAAGAAGTAGCTGTAGAAGAAGGTATGAAAACCTTGCTTGCTTACAGTCTAGATTTAGTGCGTC
AAGGTTCTACAACTCTGGAGGAAGTAGAGCGCGTAACCTTTACTGATACAGGTTTGGAAGCTGAATTAAAAGCCAAACGT
AAGAGTGGTCTAACTTGTAAAACTTGTGATGCCACATTACAACCAGAATGGCTCGATTGTCCCTACTGTATGACACCTCG
TTTTCAAGATTAG

Protein sequence :
MTYSSPQRTSTALTTKTQFSPFGNHLVQSGYVNTEQMKQALIESRKSGKKLIDVLELITGQQLSAEFIREHKKQHLFELK
ILYGVESVDPEVNQIGNLMVGQLIDSLIPVDVCRRHRLVPLWKREDQIPPYVLVAMVEPDNLDASDDLNRILRNKNLSLQ
RMVITQEDYQHLINKYLDELAIREKEKEQKRDTDINQDIKYLEDQDIEEFGEDKDADINASIKDAEDAPIIKLVNRILFK
ALQEKVSDIHIEPQEENLRIRFRKDGVLHEAFDPVPKKIIPAVTARFKIISNLDIAERRLPQDGRIRRLFEGRKVDFRVN
TLPSRYGEKVVLRILDNSSTQLGLNKLITDPETLHIVQDIVSKPFGLILVTGPTGSGKTTSLYSALAEKNDPGINISTVE
DPIEYSLPGITQVQVIREKGLDFSTALRAFLRQDPDVLLVGETRDKETAKTAIEAALTGHLVLTTLHTNDAPGAIARLGE
MGIEPFMVSSSLIGVLAQRLVRRVCSQCRIPYTPTTEELARYGLSASKETSVTFYKANSLPPESIAEAKTKNEICGACNG
IGYKGRCGVYEVMRVTENLQTLINQEAPTERIKEVAVEEGMKTLLAYSLDLVRQGSTTLEEVERVTFTDTGLEAELKAKR
KSGLTCKTCDATLQPEWLDCPYCMTPRFQD

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
gspE YP_854406.1 type II secretion protein GspE Not tested PAI I APEC-O1 Protein 3e-74 43
gspE CAE85233.1 GspE, hypothetical type II secretion protein Not tested PAI V 536 Protein 2e-74 43

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Aazo_1971 YP_003721172.1 type II secretion system protein E VFG2048 Protein 3e-74 42