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Name : HMPREF0573_10762 (HMPREF0573_10762) Accession : YP_003718575.1 Strain : Mobiluncus curtisii ATCC 43063 Genome accession: NC_014246 Putative virulence/resistance : Unknown Product : ABC transporter ATP-binding protein/membrane protein Function : - COG functional category : V : Defense mechanisms COG ID : COG1132 EC number : - Position : 890569 - 892251 bp Length : 1683 bp Strand : - Note : COG: COG1132; Pfam: PF00664,PF00005; InterPro: IPR003593 DNA sequence : ATGGCGGTTATATCCGCTATTTTGCGAGTTTTTCCGTTCGTTGCTTTAGTGGGGATTGGCAACGAACTCCTAACTTCATT AGGTAATGGCGCATCGCCCAACCAAAGCGTCATCATGTTTTGGGTACAGGTGTTAATCGGAACATTTTGTGGAGGTCTAT TCGCCTATTTTGTGGGCTTGCTGGTTACCCATATTGCAGATAATCGCCTATCGGCAAGTATTCAGCAAAAAATTATTCAT TTTCTGGGGCAAGCTCCTTTAACTTGGTTTAGCGATAACACTTCCGGGCATGTGCGTAAAGTACTGCAAGACGATGTAAA GAATCTACATATGCTAGTAGCACACCGCCCCGTAGATTCGCTGGTTGCCACCCTAATGCCCATATTTTGCGCGGGCTATA CCTTCACTATTGATTTAAGGCTCGGAGTTTTAGTAATTGTTACGGTGCCGATTTACATTATTGCCTACGCGGTGATGATG CGGGGAATGAGCGATAAGTCCTTAGAACTTGATGCCAAACTTGATCAGGTTTCCTCCGCGATGGTGGAGTTCGTAAAAGG CATCCAGGTGGTTAAGACTTTTGGAATCACCGGAAAAGCACACCGCAAATATGCCCACAGCGCCAATGAAGCCTGTGACT ATATGGAGGAATGGAATCGGCCAATGGTGCACGCGGCTTCCCTGACCGCTGCCCTCACCTCTACCCCATTGATAGTTCTC TTATTTGGGATTGTCGGCCCCTGCTTCGTCTCCAAGCATTGGGTTAGTCCGGTAGAAGTAGTTGCCGGTTGTTTAATTGC CATCGCGCTACCCTCCTCAATTAACCTGGTAACACAGCTTGCTTGGAATTATCAGTTAGCCGGTGCCGCAGCCAAAAGGA TTCTTGATCTTCGTAGGGTACAGCCCCTCTCCTGCCCCGATCGGTCACTGCATTTACCCCAAGACGCAAGCATGGAATTT AAAAACGTATCGCTCAGCTATGGCCATACCCTAGCTTTGGATAATATCTCCTTACGTTGCGCGCCCGGAACAGTAACCGC CCTCATGGGACCATCAGGGGCCGGAAAAACTACCTTGGCCAAATTGGCCGCTCGCTTCCTGGATCCCGATACGGGCACAG TACTAATCGGTGGTGTCAACCTTAAAGACCTGAGCAGAACTGACCTCTACCGTCACCTTGGGTTCGTCCTGCAAGATGCG CAGCTCTTGCGGGCTTCCATTCGCGACAATATTTCTATCGGGCGACACGATGCAGATGAAACCGAGATTATTAACGCTGC TCGCCAGGCACAGATTCATGACGAAATCATGGCACTACCTAAAGGATATGACACCGTCGTCGGGGAAGATCTGAAGCTAT CGGGAGGGCAAGCTCAGCGGATTGCTATCGCCAGAACCTTACTATTGGATGCGCCGATACTCATATTGGATGAAGCAGCA GCCATGGTAGATCCGGAATGTGAAGCACAAATCCAAAAAGCTATTAACCATCTAATGGTCGGACGTACTGTTCTGGTTAT TGACCACCGTCCCGATTCAGTCAAGAACGTCGATCAAATCGTCCTCCTTAATCAAGGAGAGCTGGTGGCCTGCGGTAATC ACCAGAAGCTACAAAATATAGAACTCTACCGTCGCCTGTGGTCGGCATCCAATGTTGAGCTTACGGAAGGAGGACGAAAC TGA Protein sequence : MAVISAILRVFPFVALVGIGNELLTSLGNGASPNQSVIMFWVQVLIGTFCGGLFAYFVGLLVTHIADNRLSASIQQKIIH FLGQAPLTWFSDNTSGHVRKVLQDDVKNLHMLVAHRPVDSLVATLMPIFCAGYTFTIDLRLGVLVIVTVPIYIIAYAVMM RGMSDKSLELDAKLDQVSSAMVEFVKGIQVVKTFGITGKAHRKYAHSANEACDYMEEWNRPMVHAASLTAALTSTPLIVL LFGIVGPCFVSKHWVSPVEVVAGCLIAIALPSSINLVTQLAWNYQLAGAAAKRILDLRRVQPLSCPDRSLHLPQDASMEF KNVSLSYGHTLALDNISLRCAPGTVTALMGPSGAGKTTLAKLAARFLDPDTGTVLIGGVNLKDLSRTDLYRHLGFVLQDA QLLRASIRDNISIGRHDADETEIINAARQAQIHDEIMALPKGYDTVVGEDLKLSGGQAQRIAIARTLLLDAPILILDEAA AMVDPECEAQIQKAINHLMVGRTVLVIDHRPDSVKNVDQIVLLNQGELVACGNHQKLQNIELYRRLWSASNVELTEGGRN |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| CDPW8_2175 | YP_005143723.1 | lipid A export ATP-binding/permease protein msbA | Not tested | Not named | Protein | 1e-106 | 45 |
