Gene Information

Name : tnp3521 (HMPREF0573_10678)
Accession : YP_003718491.1
Strain : Mobiluncus curtisii ATCC 43063
Genome accession: NC_014246
Putative virulence/resistance : Unknown
Product : IS3521 transposase
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG2801
EC number : -
Position : 796062 - 796970 bp
Length : 909 bp
Strand : -
Note : COG: COG2801; Pfam: PF00665; InterPro: IPR001584

DNA sequence :
ATGATTGCGTTTATTGACCAGTATCGTGATTGTTTCTCGGTCGAGCGTATTTGCCGGGTTATGAGAGAACACACGGTTGG
GGGCTTTATCACTTCGCGTGGTTACCGGGCTGCAAAGACCCGAAAAGTGAGCGCTAGGCAATTGAGAGATGCCTTGTTAA
TCGAGGAAATCGTGAAGATTTTCGACCAGAATTACCATGTTTATGGGATTCGTAAAATCTGGCGTGCTATGCGCCGGGCG
GGGTTTGCTATCGGACGGGAACAGACTGGCAGATTGATGCGTCTGGACGGGATTTGCGGGGCGCGTAGGGAACGCAGACC
AGTTACTACCCGTCCTTCACCCCGCCCGGATACACGCCCGGATTTGGTTAACCGCGATTTCACTGCAGATAGACCAAACC
GGCTGTGGGTCGCGGATATCACTTATGTCAGAACTGTGTCGGGTTTCGTGTACACAGCTTTTGTTACAGACGTGTATTCA
CGCAAGATTGTGGGCTGGGCTACCAGGTCAACTATGACCATTGAGGCGTTGCCGTTAGAGGCCTTAGAACAGGCGATAGG
ATGCGCTAAAGACAATCTGGCAGGACTAATCCATCACGCTGACCATGGTTCTCAATACGTAAGCATTAAATACAGTCAAC
GACTAACAGATGCAGGGATTAGATCATCGACCGGAACTATTGGGGATTCTTACGATAACGCGCTAGCCGAGACCGTCAAC
GGGCTATACAAAACCGAGTTGATTTACTCCCAGACCTGGCGCTCATGCACCGAAGTCGAATGGGCGACCCTGAACTGGGT
GTACCGGTGGAATCACCAACGTCTCCACGAATCGCTAGATTATTCCACTCCCGAGGAAGTGATAACCCAATATAATCAAA
CCCATGCTAAACAACTAGCACCCGTATAA

Protein sequence :
MIAFIDQYRDCFSVERICRVMREHTVGGFITSRGYRAAKTRKVSARQLRDALLIEEIVKIFDQNYHVYGIRKIWRAMRRA
GFAIGREQTGRLMRLDGICGARRERRPVTTRPSPRPDTRPDLVNRDFTADRPNRLWVADITYVRTVSGFVYTAFVTDVYS
RKIVGWATRSTMTIEALPLEALEQAIGCAKDNLAGLIHHADHGSQYVSIKYSQRLTDAGIRSSTGTIGDSYDNALAETVN
GLYKTELIYSQTWRSCTEVEWATLNWVYRWNHQRLHESLDYSTPEEVITQYNQTHAKQLAPV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
tnp7109-25 YP_001800853.1 transposase for insertion sequence Not tested Not named Protein 2e-82 63
CDCE8392_1958 YP_005134489.1 transposase-like protein Not tested Not named Protein 3e-55 59
unnamed AAL67406.1 putative transposase Not tested PAI II CFT073 Protein 8e-44 48
IS629 CAI43821.1 transposase for IS629 Not tested LEE Protein 2e-45 43
c5178 NP_757026.1 transposase IS629 Not tested PAI II CFT073 Protein 6e-47 43
IS629 CAI43909.1 transposase for IS629 1 Not tested LEE Protein 2e-45 43
c5213 NP_757061.1 transposase IS629 Not tested PAI II CFT073 Protein 2e-47 43
unnamed AAL67398.1 putative transposase Not tested PAI II CFT073 Protein 2e-47 43
ECO103_3585 YP_003223443.1 IS629 transposase OrfB Not tested LEE Protein 7e-45 43
IS629 CAC37926.1 transposase for IS629 Not tested LEE Protein 2e-45 43
ORF_34 AAZ04444.1 putative IS629 transposase Not tested PAI I APEC-O1 Protein 7e-46 42
APECO1_3499 YP_854312.1 transposase for IS629 Not tested PAI I APEC-O1 Protein 9e-46 42
ECO111_3721 YP_003236061.1 putative IS629 transposase OrfB Not tested LEE Protein 9e-47 42
ECO111_3776 YP_003236111.1 putative IS629 transposase OrfB Not tested LEE Protein 9e-47 42
Z1660 NP_287162.1 transposase for IS629 Not tested TAI Protein 1e-44 41
Z1221 NP_286756.1 transposase Not tested TAI Protein 8e-45 41
Z1198 NP_286733.1 transposase Not tested TAI Protein 8e-45 41
Z1638 NP_287141.1 transposase Not tested TAI Protein 8e-45 41
IS629 CAI43840.1 transposase for IS629 Not tested LEE Protein 5e-44 41
unnamed CAD42083.1 hypothetical protein Not tested PAI II 536 Protein 5e-44 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
tnp3521 YP_003718491.1 IS3521 transposase VFG1602 Protein 3e-44 41