Gene Information

Name : HMPREF0573_10675 (HMPREF0573_10675)
Accession : YP_003718488.1
Strain : Mobiluncus curtisii ATCC 43063
Genome accession: NC_014246
Putative virulence/resistance : Virulence
Product : ABC transporter ATP-binding protein
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1136
EC number : -
Position : 793708 - 794382 bp
Length : 675 bp
Strand : -
Note : COG: COG1136; Pfam: PF00005; InterPro: IPR003593

DNA sequence : 
GTGAACCCGCCGACAACCCCGATACTTTGCGCCCGTGAGCTAAAGAAAACCTACGGGCTTACCCCGGCACTGCGTGGCGT
GTCCCTGGACGTAACGCGCGGTGAAATCTTGGCAATTATGGGGCCTTCGGGCTCCGGCAAGTCCACCTTGTTACACGCCT
TGGCGGGAATCGAACTGCCAGATTCGGGCTCGGTGTCCTACAATGACCGTGAGCTCACCAGCTTGAGCGATGCGCAGCGC
ACGGTGTTGCGCCGCACGGATTTCGGTTTCGTATTCCAGTTTTCCCAACTGGTTCCCGAGCTGACAGCGGTGGATAACAT
CGCAGTGCCACTGCTTTTGAACGGGGTCGCGAAGAAAACCGCGTATGCCCAGGCTCACGAATGGTTGGCGACTGTAGGCC
TGGAAGATCACGCGGATTCACTTCCCGGCGAGCTTTCTGGCGGGCAAGCCCAGCGAATCGCTATCGCCCGCGCCTTGGCA
CCGCGCCCCGCAGTGCTGTTCGCCGATGAACCCACCGGATCCTTGGATTCCCTGAATTCTGAGACGGTGATGACCTTGCT
GGTGGATTTGGTGCGCGTGCGGGGGTTGACAGTGGTACTGGTGACTCATGAACCTACCGTTGCAGCCTATGCCGACCGTG
AAATAATCGTGCGTGACGGCTTGGTGGAGGTATAG

Protein sequence : 
MNPPTTPILCARELKKTYGLTPALRGVSLDVTRGEILAIMGPSGSGKSTLLHALAGIELPDSGSVSYNDRELTSLSDAQR
TVLRRTDFGFVFQFSQLVPELTAVDNIAVPLLLNGVAKKTAYAQAHEWLATVGLEDHADSLPGELSGGQAQRIAIARALA
PRPAVLFADEPTGSLDSLNSETVMTLLVDLVRVRGLTVVLVTHEPTVAAYADREIIVRDGLVEV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 2e-18 46
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 2e-19 43
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 2e-19 43
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 2e-19 43
unnamed ABA47263.1 ABC transporter Not tested S-PAI Protein 3e-09 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
HMPREF0573_10675 YP_003718488.1 ABC transporter ATP-binding protein NC_008702.1.4606598. Protein 4e-23 48
HMPREF0573_10675 YP_003718488.1 ABC transporter ATP-binding protein CP001581.1.gene598.p Protein 4e-26 44
HMPREF0573_10675 YP_003718488.1 ABC transporter ATP-binding protein CP001581.1.gene798.p Protein 2e-24 43
HMPREF0573_10675 YP_003718488.1 ABC transporter ATP-binding protein NC_012469.1.7686878. Protein 6e-27 43

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
HMPREF0573_10675 YP_003718488.1 ABC transporter ATP-binding protein VFG2059 Protein 2e-06 41