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Name : clp (HMPREF0573_10539) Accession : YP_003718352.1 Strain : Mobiluncus curtisii ATCC 43063 Genome accession: NC_014246 Putative virulence/resistance : Virulence Product : endopeptidase Clp Function : - COG functional category : O : Posttranslational modification, protein turnover, chaperones COG ID : COG0542 EC number : - Position : 637645 - 640401 bp Length : 2757 bp Strand : - Note : COG: COG0542; Pfam: PF02861,PF00004,PF07724; InterPro: IPR003959 DNA sequence : ATGATATCTATGGATCAAAAATTTACGACTAAGTCTCAGGAGGCTCTGGCAACGGCACTGCGTACCGCGGGGGCGGCTGG CAATGCCATGCTTGAACCGATACACCTGCTTTCTGCGCTACTGGAAGACCGTGAAGGAATTGCCTTCGAAGTGCTCAGCA GTGTGGCTGATGCTGACGCTATTGGTCGGGAGGTACGCCGTGAACTGGCGTCTTTACCGGGGGCGACCGGTGAATCTGTG GCGGAACCGCAGCCTTCCCAAGCTATGCTAAACGTCATTAGTGCAGCTGGTGCGAAAGCGCAAGAGCGGGGGGATGATTA TGTCTCTACCGAACACTTACTGTTGGGGTTGGCTGAAAATGAGGGCAGAGTCGGCAAGATTCTGCGCGATGCGGGAGCTA ACGACAAAAAACTGCGCCAAGCTATTAAAAAGATTCGCGGAGACGCCAAAGTGACCTCCCCGAACCCCGAAGCTACGTTT AAAGCCCTGGAAAAATACGGCGATGACCTGACCCAGCGGGCTATGGATGGCAACCTTGACCCGGTAATTGGGCGCGACAG CGAAATCCGGCGGGTCATTCAGGTGCTGAGTCGCCGCACCAAGAATAACCCGGTGTTGATTGGGGAGCCCGGCGTGGGCA AGACCGCCGTGGTAGAAGGTCTAGCCCAACGTATCGTAGCGGGAGACGTGCCCGATTCCCTCAAGCACAAGCATCTCATT GCTCTTGATTTGGCAGCGATGGTAGCGGGGGCGCAATATCGCGGTCAGTTCGAGGAACGGCTGAAGGCAGTGCTGGAAGA AATCAAGAACGCTGAAGGTGAAGTGGTGACCTTCATTGACGAGCTTCACACCGTGGTCGGGGCGGGAGCCAGTGGCGGGT CGATGGACGCCTCAAACATGCTGAAGCCCATGCTGGCGCGCGGAGAGCTGCGTCTAGTGGGGGCGACGACTTTGGACGAG TACCGCGAGCACATTGAAAAGGATCCGGCTTTGGAACGGAGGTTCCAAACTGTATTCGTGGGGGAGCCCAGCGTGGAGGA CACCGTCGCCATCTTGCGTGGCATAGCTCCGAAATATGAGGCTCATCACAAGGTGACTATTGCGGACGGGGCTTTAGTGG CTGCCGCACAGCTTTCTAACCGTTATATTTCCGGTCGTCAGCTGCCAGATAAGGCTATCGATTTGATTGACGAAGCGGCG TCTAGGCTGCGGATGGAGCTGGATTCCTCGCCGGAGGAGATTGACTCTCTGCGCCGAGAAGTGGAGCGGGTCAATATGGA GTTGTCCTATTTGAACGCCTCCGACCCGAACCGGGAGGATCCGGCGACCGAGGGGCGCGTGGCGCAACTGCAAGCCAGTT TGGATGAAAAGCAGGCGCAGCTAGATCGGCTAAACCTGCGGTGGGAAGCCGAAAAGGCGGGTCATAACCGAGTCGGCGAA CTGCGCGTAAAGCTGGACGAACTGAATACGGCTCTGGAGCAAGCCATGCGCGAGGGGCGTTGGGAAGACGCAGGACGTCT GCAAAATGGCGAAATTCCAGCGATTCAAGCCCAGATTACGGCAGCGGAAGGCGAGTCCTCGAACCAGTCGAGTGCGGCGG GGCACGCTCCCACCGATTCCGCCATTTCTGGAACAAACAGTACAAAACCTGGTCATCCGGATGCTGGCGACTCGCAAGAC GGTCCCATGATTGCTGAGAAAGTCGATGCTGCCGAGATTGCGGAAGTAGTCGCCTCTTGGACTGGAATCCCGGTGGGCAA GCTGCTCCGGGGCGAATCTGAAAAGCTGCTGCACATGGAGGAATACCTGGGGCAACGCTTGATTGGGCAAAAGGATGCCG TGCGCGCGGTGTCGAATGCGGTGCGTCGGGCGCGTGCAGGAGTCTCCGACCCGAATCGTCCGACAGGCTCTTTCCTGTTC CTGGGACCGACTGGGGTAGGCAAGACCGAGCTGGCGAAGGCTCTGGCTGATTTCCTGTTTGATGATGAAAAGGCTTTGAC CCGTATTGATATGAGTGAATATGGTGAGAAGCACTCGGTCGCGCGCCTGATTGGTGCCCCTCCGGGTTATGTCGGATACG AAGAAGGCGGTCAGCTGACCGAAGCGGTGCGGCGGCGCCCTTATGGGGTGGTGTTGCTCGATGAGGTCGAAAAGGCGCAT CCGGATGTTTACGACATTTTGCTGCAGGTGCTTGATGACGGTCGATTGACTGACGGTCAAGGGCGTACGGTTGATTTCCG CAACGTCATTCTGGTGCTGACCTCGAACCTGGGGTCTCAGTTCCTGATTGATCGTGAGGCTGATCCGGCAGAGGCGCATC GCCAAGTTTTGGATTTAGTGCGTGCCGCATTCAAACCGGAGTTCTTAAACCGTTTGGACGAAACCATCATGTTTGAGGCT CTGTCTACCGAGGATTTGGAACAGATTGTCGACATCCAGATTCACCAGTTGACCACGCGCTTGGCGGAATCTCAGTTGAC CCTCGAAGTCACCGAGTCGGCGCGATCTTGGCTGGCGGTCACGGGCTACGATCCGACTTACGGAGCGCGCCCGCTACGTC GCTTGATTCAACGCGAGATTGGCGACCAGCTGGCAGAAAAGCTGCTGGCGGGGGACATTACGCCCGGTTCGACCGTGGTC GTGGACATGCCCAATTTCAGTCCCACAGATTTAATAAAATCTGGAGACTTGAGTGAATTGACAGGACCAATGTCAGACCA ATATCGACTGGAGCTAAGGGTAAAAAACGCCCAATAA Protein sequence : MISMDQKFTTKSQEALATALRTAGAAGNAMLEPIHLLSALLEDREGIAFEVLSSVADADAIGREVRRELASLPGATGESV AEPQPSQAMLNVISAAGAKAQERGDDYVSTEHLLLGLAENEGRVGKILRDAGANDKKLRQAIKKIRGDAKVTSPNPEATF KALEKYGDDLTQRAMDGNLDPVIGRDSEIRRVIQVLSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVAGDVPDSLKHKHLI ALDLAAMVAGAQYRGQFEERLKAVLEEIKNAEGEVVTFIDELHTVVGAGASGGSMDASNMLKPMLARGELRLVGATTLDE YREHIEKDPALERRFQTVFVGEPSVEDTVAILRGIAPKYEAHHKVTIADGALVAAAQLSNRYISGRQLPDKAIDLIDEAA SRLRMELDSSPEEIDSLRREVERVNMELSYLNASDPNREDPATEGRVAQLQASLDEKQAQLDRLNLRWEAEKAGHNRVGE LRVKLDELNTALEQAMREGRWEDAGRLQNGEIPAIQAQITAAEGESSNQSSAAGHAPTDSAISGTNSTKPGHPDAGDSQD GPMIAEKVDAAEIAEVVASWTGIPVGKLLRGESEKLLHMEEYLGQRLIGQKDAVRAVSNAVRRARAGVSDPNRPTGSFLF LGPTGVGKTELAKALADFLFDDEKALTRIDMSEYGEKHSVARLIGAPPGYVGYEEGGQLTEAVRRRPYGVVLLDEVEKAH PDVYDILLQVLDDGRLTDGQGRTVDFRNVILVLTSNLGSQFLIDREADPAEAHRQVLDLVRAAFKPEFLNRLDETIMFEA LSTEDLEQIVDIQIHQLTTRLAESQLTLEVTESARSWLAVTGYDPTYGARPLRRLIQREIGDQLAEKLLAGDITPGSTVV VDMPNFSPTDLIKSGDLSELTGPMSDQYRLELRVKNAQ |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| STY0294 | NP_454876.1 | ClpB-like protein | Not tested | SPI-6 | Protein | 3e-96 | 41 |
| aec27 | YP_851418.1 | ATPase | Not tested | PAI II APEC-O1 | Protein | 9e-107 | 41 |
| aec27 | AAQ96721.1 | Aec27 | Not tested | AGI-1 | Protein | 7e-107 | 41 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| clp | YP_003718352.1 | endopeptidase Clp | VFG2076 | Protein | 1e-113 | 43 |
| clp | YP_003718352.1 | endopeptidase Clp | VFG2084 | Protein | 3e-103 | 41 |
