Gene Information

Name : HMPREF0573_10428 (HMPREF0573_10428)
Accession : YP_003718241.1
Strain : Mobiluncus curtisii ATCC 43063
Genome accession: NC_014246
Putative virulence/resistance : Virulence
Product : chaperone ATPase
Function : -
COG functional category : O : Posttranslational modification, protein turnover, chaperones
COG ID : COG0542
EC number : -
Position : 490167 - 492821 bp
Length : 2655 bp
Strand : -
Note : COG: COG0542; Pfam: PF02861,PF00004,PF02151,PF07724; InterPro: IPR003593

DNA sequence :
ATGTTTGAAAGATTTACCGACCGAGCCCGCCGGGTGGTGGTGTTAGCCCAAGACGAAGCCCGCCGGCTGAACCAAAACTA
TATCGGCACCGAACACCTGCTGCTGGGACTAATCCATGAGGGTGATGGCATCGCGGCGCGAGCTTTGGAAACGATGGGTA
TCTCGCTAGAGGCTGTGCGCGCTCAGGTGATTGAGATTATCGGTGAGGGAGAGCAGCCCACTACCGGTCATATTCCCTTT
ACCCCGCGAGCCCGCAAGGTGCTGGAATTTTCTATGCGTGAGGCGTTGCAGTTAGGGCATAACTACATCGGTACCGAACA
CATACTGCTGGGGTTGTTGCGGGAAGGCGACGGGGTCGCCGCCCAAGTCCTCATCAAACTCGGTGCTGACCTGAACAATG
TGCGCCAGACCGTTATCGAACTGCTGTCTGGATACCAGGGCGGTCAGTCTCAACAGAGCGGTCGCGATACTGTGGGCGTC
GGTGGCGGTCGTGCCGATAACCCCAACGCGGGGGGTAACTCGGCAATCCTGGACCAGTTCGGACGCAACCTCACCCAGGC
GGCGCGGGAGTCCAAACTTGACCCGGTCATTGGACGCACCAAGGAAATGGAACGCGTCATGCAAATCTTGTCCCGGCGCA
CCAAGAACAATCCGGTCTTGGTTGGTGAACCGGGAGTGGGTAAAACCGCCGTGGTGGAAGGTCTGGCCCAGAGTATTGTC
CGCGGAGACGTCCCGGAGACTTTGAAAGATAAACAGCTTTATTCTCTGGATATGGGTTCCTTGGTGGCGGGTTCGCGCTA
CCGTGGTGATTTTGAGGAACGTCTCAAGAAGGTGCTGAAGGAAATCCGCACCCGTGGGGACATCATCTTGTTCATCGACG
AGATTCATACCCTGGTCGGTGCGGGCGCAGCGGAGGGCGCGATTGACGCTGCCTCCATTTTGAAACCGATGCTGGCTCGC
GGTGAGTTACAGACCATCGGCGCCACCACCATCGAGGAGTACCGCAAGTACATCGAAAAGGACTCGGCTCTGGAACGACG
TTTCCAGCCGGTCAAGGTCGAAGAACCCAGCGTGGAAGAAACCGTTGCCATCCTCAAGGGGTTGCGGGACCGTTACGAGT
CGCATCACCGAGTCATGATTACTGACGCGGCTCTCGCTGCCGCGGCGCAGCTGGCGGATCGTTACGTATCTGACCGGTTC
TTACCGGATAAGGCAATTGACCTGGTTGACGAAGCTGGAGCGCGTTTGCGGATTAAGCGCATGACGGCGCCGCCAGAGCT
GAAGGAAGTCGACGAAAAAATCGCCAAGACCCGTCAAGCCAAAGAGGCTGCCATTGATGCCCAAGATTTTGAAAAGGCTG
CCCAGCTGCGTGACGAGGAAAAGCATCTGACGGAAGAACGCGCAGCGAAGGAATCCCAGTGGCGCCAGGGCGAAGACACC
TCTGAATCGGTGGTTGACGAGGAGCAAATCGCCGAGGTCTTGGCGATGTCCACCGGCATTCCGGTGTTCAAACTCACGCA
GGCAGAGTCCTCGAAACTGCTGCGGATGGAAGACGAACTGCACAAGCGCATTATCGGGCAAGACGAAGCGGTCAAGGCAG
TGTCCCAGTCCATCCGCCGGACCCGCGCCGGTTTGAAAGACCCGAAGCGACCCGGTGGCTCGTTCGTGTTTGCCGGACCC
ACCGGGGTGGGCAAGACCGAGCTCGCCAAAGCTCTGGCAGAATTCCTCTTTGGTGACGAAAACGCCCTGGTACAGCTGGA
TATGTCCGAATTTTCGGAAAAGCATACAGCATCCCGACTGTTCGGCTCGCCTCCGGGCTACGTCGGCTATGACGAGGGCG
GTCAGCTCACCGAAAAGGTGCGCCGCAAGCCCTTTAGCGTCGTGCTGTTCGACGAAGTGGAAAAGGCACACCCGGATATC
TTTAACAGCCTGTTGCAGGTGTTGGAAGAGGGACACCTCACGGACTCGCAAGGACGCCTGGTCGACTTTAAGAACACCAT
CATCATCATGACCACGAACCTCGGTACCCGTGAAATCAACAAGGGCGTGCTGACTGGTTTCCAAGCCAGCGGCGAGTTAG
CCACGGACTATCAGCGGATGAAGGGCAAGGTTCAGGAAGAACTGAAACAGCACTTCCGTCCCGAGTTCCTCAACCGGGTG
GACGAAATCGTGGTGTTCCCGCAGCTTGAAAAGGGCGAAATCCTGCAGATTGTTGACCTGATGATCGCCAAGCTCGATGA
CCGGATGCTGGATCAGGGCATGGCTTTGCAGATTACTCCCGCGGCGCGAGCTTTGCTGGCGCACAAGGGCTTCGACAAGA
CGTTGGGAGCTCGCCCGTTGCGTCGGGCGGTGCAGCGCGAAATTGAGGACGTTCTGTCCGAAAAGATTTTGTTCTCTGAG
CTGGGCGAAGGACAGACCGTAACGGTAGACGTCGAACCGAGGTTCATCAAGCACGAGTCTGCAGACAAGGTGAATGGGAC
GGATTGGGAGTTCACTGACGACGCCGAATTCACATTTACCGGCTCGGACGGGCTGCCCGAAGGTCGAGCTCAACAGCGCC
GCAAGCTCGAAGACGTGACCGCAGCGACCATTCGTGAAGCCGAATTGGCAGCTCGGGAAGCGGATGATTCTCCGGATAAA
GAGCCGGCGGCATAA

Protein sequence :
MFERFTDRARRVVVLAQDEARRLNQNYIGTEHLLLGLIHEGDGIAARALETMGISLEAVRAQVIEIIGEGEQPTTGHIPF
TPRARKVLEFSMREALQLGHNYIGTEHILLGLLREGDGVAAQVLIKLGADLNNVRQTVIELLSGYQGGQSQQSGRDTVGV
GGGRADNPNAGGNSAILDQFGRNLTQAARESKLDPVIGRTKEMERVMQILSRRTKNNPVLVGEPGVGKTAVVEGLAQSIV
RGDVPETLKDKQLYSLDMGSLVAGSRYRGDFEERLKKVLKEIRTRGDIILFIDEIHTLVGAGAAEGAIDAASILKPMLAR
GELQTIGATTIEEYRKYIEKDSALERRFQPVKVEEPSVEETVAILKGLRDRYESHHRVMITDAALAAAAQLADRYVSDRF
LPDKAIDLVDEAGARLRIKRMTAPPELKEVDEKIAKTRQAKEAAIDAQDFEKAAQLRDEEKHLTEERAAKESQWRQGEDT
SESVVDEEQIAEVLAMSTGIPVFKLTQAESSKLLRMEDELHKRIIGQDEAVKAVSQSIRRTRAGLKDPKRPGGSFVFAGP
TGVGKTELAKALAEFLFGDENALVQLDMSEFSEKHTASRLFGSPPGYVGYDEGGQLTEKVRRKPFSVVLFDEVEKAHPDI
FNSLLQVLEEGHLTDSQGRLVDFKNTIIIMTTNLGTREINKGVLTGFQASGELATDYQRMKGKVQEELKQHFRPEFLNRV
DEIVVFPQLEKGEILQIVDLMIAKLDDRMLDQGMALQITPAARALLAHKGFDKTLGARPLRRAVQREIEDVLSEKILFSE
LGEGQTVTVDVEPRFIKHESADKVNGTDWEFTDDAEFTFTGSDGLPEGRAQQRRKLEDVTAATIREAELAAREADDSPDK
EPAA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
clpC YP_005163377.1 ATP-dependent Clp protease ATP-binding subunit Not tested Not named Protein 0.0 72

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
HMPREF0573_10428 YP_003718241.1 chaperone ATPase VFG0079 Protein 0.0 58
HMPREF0573_10428 YP_003718241.1 chaperone ATPase VFG0080 Protein 2e-155 50
HMPREF0573_10428 YP_003718241.1 chaperone ATPase VFG2084 Protein 4e-93 41