Gene Information

Name : HMPREF0573_10410 (HMPREF0573_10410)
Accession : YP_003718223.1
Strain : Mobiluncus curtisii ATCC 43063
Genome accession: NC_014246
Putative virulence/resistance : Virulence
Product : response regulator
Function : -
COG functional category : T : Signal transduction mechanisms
COG ID : COG0745
EC number : -
Position : 466719 - 467402 bp
Length : 684 bp
Strand : -
Note : COG: COG0745; Pfam: PF00072,PF00486; InterPro: IPR001789

DNA sequence : 
ATGAGTGCAAAAATCCTGGTAGTAGATGATGACCAAGCCCTGAGCGAGATGATTGGCATTATTCTGGAATCATCCGCCTA
TGAACCAAGTTTTTGTGCCGACGGTGCAAAAGCCGTGGATAAGTTTCGGGAAGTCGAACCTGATTTGCTGCTTCTCGATT
TGATGCTGCCGGGTATGGACGGTATCGAGATTTGCCGCCGAATCCGCGAGTTCTCTAATGTGCCCATCATCATGCTGACC
GCAAAATCGGACACTACCGACGTAGTGGCAGGGTTGGAAGCGGGAGCGGATGATTACATTCCCAAGCCTTTCAAGCCTAA
GGAGTTATTGGCACGGGTCGCTGCTAGGTTGCGCAACCTGGATGCAGCTGAACATGACGTCTTGAAAGCTGCGGGGGTGG
AAATTAACCTCGCTTCTCACGAGGTGAGTCGAGGGGGAAAGCCCTTGAACCTCACTCCTCTGGAGTATGACTTGTTGGTG
GCGCTAGCCACAAAGCCAGGGCGCGTCTTTTCCCGCGAAGAATTGTTGGAACAGGTCTGGGGGTTGCGTCATGCCTCCGA
CACGCGCCTGGTGAACGTACACGTCCAGAGGCTACGCGCCAAGGTCGAACTTGACCCGGATAATCCTACTGTGGTTCTTA
CAGTCCGCGGCGTGGGCTATCGGATTGGGACTGAACCTCAGTGA

Protein sequence : 
MSAKILVVDDDQALSEMIGIILESSAYEPSFCADGAKAVDKFREVEPDLLLLDLMLPGMDGIEICRRIREFSNVPIIMLT
AKSDTTDVVAGLEAGADDYIPKPFKPKELLARVAARLRNLDAAEHDVLKAAGVEINLASHEVSRGGKPLNLTPLEYDLLV
ALATKPGRVFSREELLEQVWGLRHASDTRLVNVHVQRLRAKVELDPDNPTVVLTVRGVGYRIGTEPQ

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed CAD42044.1 hypothetical protein Not tested PAI II 536 Protein 2e-27 42
c3565 NP_755440.1 response regulator Not tested PAI I CFT073 Protein 4e-27 42

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
HMPREF0573_10410 YP_003718223.1 response regulator AE000516.2.gene3505. Protein 5e-55 64
HMPREF0573_10410 YP_003718223.1 response regulator AE015929.1.gene1106. Protein 4e-23 45
HMPREF0573_10410 YP_003718223.1 response regulator NC_003923.1003417.p0 Protein 6e-25 44
HMPREF0573_10410 YP_003718223.1 response regulator NC_013450.8614146.p0 Protein 6e-25 44
HMPREF0573_10410 YP_003718223.1 response regulator NC_002951.3238224.p0 Protein 6e-25 44
HMPREF0573_10410 YP_003718223.1 response regulator NC_007793.3914065.p0 Protein 6e-25 44
HMPREF0573_10410 YP_003718223.1 response regulator NC_002758.1121390.p0 Protein 6e-25 44
HMPREF0573_10410 YP_003718223.1 response regulator NC_010079.5776364.p0 Protein 6e-25 44
HMPREF0573_10410 YP_003718223.1 response regulator NC_002952.2859858.p0 Protein 6e-25 44
HMPREF0573_10410 YP_003718223.1 response regulator NC_007622.3794948.p0 Protein 6e-25 44
HMPREF0573_10410 YP_003718223.1 response regulator NC_002952.2859905.p0 Protein 2e-31 43
HMPREF0573_10410 YP_003718223.1 response regulator NC_002758.1121668.p0 Protein 3e-31 43
HMPREF0573_10410 YP_003718223.1 response regulator NC_009641.5332272.p0 Protein 3e-31 43
HMPREF0573_10410 YP_003718223.1 response regulator NC_013450.8614421.p0 Protein 3e-31 43
HMPREF0573_10410 YP_003718223.1 response regulator NC_007793.3914279.p0 Protein 3e-31 43
HMPREF0573_10410 YP_003718223.1 response regulator NC_003923.1003749.p0 Protein 3e-31 43
HMPREF0573_10410 YP_003718223.1 response regulator NC_007622.3794472.p0 Protein 2e-31 43
HMPREF0573_10410 YP_003718223.1 response regulator NC_002745.1124361.p0 Protein 3e-31 43
HMPREF0573_10410 YP_003718223.1 response regulator NC_009782.5559369.p0 Protein 3e-31 43
HMPREF0573_10410 YP_003718223.1 response regulator NC_002951.3237708.p0 Protein 3e-31 43
HMPREF0573_10410 YP_003718223.1 response regulator AF130997.1.orf0.gene Protein 2e-23 42
HMPREF0573_10410 YP_003718223.1 response regulator CP001918.1.gene3444. Protein 2e-26 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
HMPREF0573_10410 YP_003718223.1 response regulator VFG1390 Protein 2e-24 42
HMPREF0573_10410 YP_003718223.1 response regulator VFG1563 Protein 1e-27 42
HMPREF0573_10410 YP_003718223.1 response regulator VFG1702 Protein 2e-27 42