Gene Information

Name : tnp3521-2 (HMPREF0573_11361)
Accession : YP_003719174.1
Strain : Mobiluncus curtisii ATCC 43063
Genome accession: NC_014246
Putative virulence/resistance : Unknown
Product : integrase catalytic domain-containing protein
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG2801
EC number : -
Position : 1551291 - 1552097 bp
Length : 807 bp
Strand : +
Note : COG: COG2801; Pfam: PF00665; InterPro: IPR001584

DNA sequence : 
ATGATTGCGTTTATTGACCAGTATCGTGATTGTTTCTCGGTCGAGCGTATTTGCCGGGTTATGAGAGAACACACGGTTGG
GGGCTTCCTCACGCCACGTGGTTACCGGGCGGCAAAGACCCGAAAAGTGAGCGCTAGGCAATTGAGAGATGCCTTGTTAA
TCGAGGAAATCGTGAAGATTTTCGACCAGAATTACCGTGTTTACGGGATTCGTAAAATCTGGCGTGCTATGCGCCGGACT
GGATGGGATATCGGGCGGGAACAGACTGGCAGATTGATGCGTCTGGACGGGATTTGCGGGGCGCGTAGGGGACGTAGACC
AGTTACTACCCGTCCTTCTAAGGTCCCTGATGCACGCCCTAATCTAGTTAATCGCCAGTTTAGAGCAGATAGACCTAACA
GGTTGTGGGTAGCAGATATTACCTATGTTCGTGCTCTTTCTGGTTTTGTTTATACAGCGTTCGTAACCGATGTGTATTCA
CGCAAGATTGTGGGGTGGGCTACCCGGTCATCAATGAAAACCGAGGTACTGTCCCTGCAAGCACTCGAGCAGGCAACAGC
CCTAGCAAGAGACAATCTTGCAGGCCTGGTGCATCATTGCGATCACGGTAGCCAGTACACCTCCATTGCCTATAACGACA
AACTCACTGATTACGGTATAAAACCTTCTACCGGAACCGTGGGAGACTCCTACGATAACGCCCTGGCAGAGACCGTAAAT
GGTTTATATAAGACCGAACTTATCTATTCGCAAACCTGGGAAACCCTGTCCGAGGTCGAGTTCGCCACCATGAACTGGGT
TCACTGA

Protein sequence : 
MIAFIDQYRDCFSVERICRVMREHTVGGFLTPRGYRAAKTRKVSARQLRDALLIEEIVKIFDQNYRVYGIRKIWRAMRRT
GWDIGREQTGRLMRLDGICGARRGRRPVTTRPSKVPDARPNLVNRQFRADRPNRLWVADITYVRALSGFVYTAFVTDVYS
RKIVGWATRSSMKTEVLSLQALEQATALARDNLAGLVHHCDHGSQYTSIAYNDKLTDYGIKPSTGTVGDSYDNALAETVN
GLYKTELIYSQTWETLSEVEFATMNWVH

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
CDCE8392_1774 YP_005134308.1 transposase-like protein Not tested Not named Protein 8e-56 65
tnp7109-25 YP_001800853.1 transposase for insertion sequence Not tested Not named Protein 7e-80 62
CDC7B_2035 YP_005163476.1 transposase-like protein Not tested Not named Protein 5e-53 60
CDCE8392_1958 YP_005134489.1 transposase-like protein Not tested Not named Protein 2e-62 58
unnamed AAL67406.1 putative transposase Not tested PAI II CFT073 Protein 4e-42 50
c5213 NP_757061.1 transposase IS629 Not tested PAI II CFT073 Protein 1e-45 44
unnamed AAL67398.1 putative transposase Not tested PAI II CFT073 Protein 6e-46 44
c5178 NP_757026.1 transposase IS629 Not tested PAI II CFT073 Protein 5e-45 44
IS629 CAI43840.1 transposase for IS629 Not tested LEE Protein 2e-43 43
IS629 CAC37926.1 transposase for IS629 Not tested LEE Protein 5e-44 43
ECO103_3585 YP_003223443.1 IS629 transposase OrfB Not tested LEE Protein 7e-44 43
IS629 CAI43821.1 transposase for IS629 Not tested LEE Protein 5e-44 43
IS629 CAI43909.1 transposase for IS629 1 Not tested LEE Protein 5e-44 43
ECO111_3776 YP_003236111.1 putative IS629 transposase OrfB Not tested LEE Protein 2e-45 43
Z1660 NP_287162.1 transposase for IS629 Not tested TAI Protein 9e-44 43
Z1221 NP_286756.1 transposase Not tested TAI Protein 5e-44 43
Z1198 NP_286733.1 transposase Not tested TAI Protein 4e-44 43
ORF_34 AAZ04444.1 putative IS629 transposase Not tested PAI I APEC-O1 Protein 2e-44 43
Z1638 NP_287141.1 transposase Not tested TAI Protein 4e-44 43
APECO1_3499 YP_854312.1 transposase for IS629 Not tested PAI I APEC-O1 Protein 2e-44 43
ECO111_3721 YP_003236061.1 putative IS629 transposase OrfB Not tested LEE Protein 2e-45 43
c5167 NP_757015.1 transposase IS629 Not tested PAI II CFT073 Protein 1e-32 42
unnamed CAD42083.1 hypothetical protein Not tested PAI II 536 Protein 5e-43 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
tnp3521-2 YP_003719174.1 integrase catalytic domain-containing protein VFG1602 Protein 3e-43 42