Gene Information

Name : CA2559_03130 (CA2559_03130)
Accession : YP_003715390.1
Strain : Croceibacter atlanticus HTCC2559
Genome accession: NC_014230
Putative virulence/resistance : Virulence
Product : pyruvate kinase
Function : -
COG functional category : G : Carbohydrate transport and metabolism
COG ID : COG0469
EC number : -
Position : 716599 - 718029 bp
Length : 1431 bp
Strand : -
Note : -

DNA sequence :
ATGCCTAATAGAAAGAAAACCAAAATTGTAGCAACCTTAGGACCATCAACGTCTACTAAAACGGTCTTAAAACAAATGCT
TGAAGCAGGTGCCAATGTATTTAGAATTAATTTTTCTCATGCTAATTATGATGATGTAAAGAAACGCATCTCAATGATTA
GAGAGCTTAATGAAAAGTATGGATTTAACGCATCTATCCTTGGAGATTTACAAGGCCCTAAATTACGTGTAGGTGTAATG
AAAGGTGAAGTTATTGTAAGTAAAGGCGATAAATTATCCTTTTGTACCGGCGAAGAATTTGAAGGAACAGCAGATCGTGT
GTATATGAACTACGACACCTTCCCAAGAGATGTAAAGGCAGGCGAGCGTATTCTTCTTGATGATGGTAAACTAATCTTTG
AAGTTTTAGAAACAAATAAAAAAGATGAAGTAAAAGCCAAAGTTATACAAGGTGGTCCTTTACGTTCTAGAAAAGGAGTA
AACCTACCTAATACCAACATTTCTTTACCTGCATTAACAGAAAAAGATGTTAAAGATGCCATTTTTGCTTGTGAACAAGG
AGTAGATTGGATGGCATTATCTTTTGTACGTCACGCAGAAGACCTGCAAGAATTACAAGAACTCATTAAAAAACATAGCG
AGCACAAAATTCCAATAATAGCCAAGATAGAAAAGCCAGAAGGCGTTGAGAACATAGATAAGATAGTTGCTTACTGTGAT
GGTTTAATGGTTGCGCGTGGAGATTTAGGTGTTGAAATTCCAGCACAAGAAGTACCTTTAATACAAAAGCAATTAGTACT
AAAAGCAAAGCAAGCAAGAATACCTGTAATTATTGCTACACAGATGATGGAAACAATGATTACTAGCCTTACGCCAACAC
GTGCAGAGGTTAATGATGTAGCAAACTCTGTGATGGATGGTGCAGATGCAGTAATGTTAAGTGGAGAAACCTCTGTAGGA
CAATATCCAGTTCAGGTAATTCAAAAAATGTGTCAGATTCTTAAAACTGTGGAAGACTCTCCATTAATTCACGTACCAGA
AGAGCCACCACATATTCGTACTAAGCGATACATAACAAAATCAATATGTTATCATGCAGCACATATGGCTAATGAAATTA
AGGCTAAAGCTATTTGTACACTAACAAATAGTGGTTATACAGCATTTCAAATTTCTGCTTGGAGACCTAGTGCACATATA
TTAGCATTTACATCAAACAAACGCATACTTACACAATTAAGCTTACTTTGGGGTGTGCATGCGTACTACTATGACAAGTT
TACTAGTACAGACGATACTGTAGAAGATGTTAACGGTATTGCAAAACAAATGAAGTATGTTAAAAAATCTGAATTTGTTA
TAAACCTAGCAGCAATGCCAATTTCAGATAAAGGTATGGTAAACACATTAAGAGTTTCAGAGATTAAATAA

Protein sequence :
MPNRKKTKIVATLGPSTSTKTVLKQMLEAGANVFRINFSHANYDDVKKRISMIRELNEKYGFNASILGDLQGPKLRVGVM
KGEVIVSKGDKLSFCTGEEFEGTADRVYMNYDTFPRDVKAGERILLDDGKLIFEVLETNKKDEVKAKVIQGGPLRSRKGV
NLPNTNISLPALTEKDVKDAIFACEQGVDWMALSFVRHAEDLQELQELIKKHSEHKIPIIAKIEKPEGVENIDKIVAYCD
GLMVARGDLGVEIPAQEVPLIQKQLVLKAKQARIPVIIATQMMETMITSLTPTRAEVNDVANSVMDGADAVMLSGETSVG
QYPVQVIQKMCQILKTVEDSPLIHVPEEPPHIRTKRYITKSICYHAAHMANEIKAKAICTLTNSGYTAFQISAWRPSAHI
LAFTSNKRILTQLSLLWGVHAYYYDKFTSTDDTVEDVNGIAKQMKYVKKSEFVINLAAMPISDKGMVNTLRVSEIK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
pykF YP_216386.1 pyruvate kinase Not tested SPI-2 Protein 3e-64 43
pykF NP_805051.1 pyruvate kinase Not tested SPI-2 Protein 3e-64 43
STY1744 NP_456147.1 pyruvate kinase Not tested SPI-2 Protein 7e-65 43
pykF CAA68205.1 pyruvate kinase like protein Not tested SPI-2 Protein 1e-63 43

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
CA2559_03130 YP_003715390.1 pyruvate kinase VFG0479 Protein 1e-64 43