Gene Information

Name : CA2559_02040 (CA2559_02040)
Accession : YP_003715174.1
Strain : Croceibacter atlanticus HTCC2559
Genome accession: NC_014230
Putative virulence/resistance : Virulence
Product : zinc ABC transporter ATP-binding protein
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG1121
EC number : -
Position : 499511 - 500275 bp
Length : 765 bp
Strand : +
Note : -

DNA sequence : 
ATGATAAAAGATTCAAACAAAGTAGAGGTTAAGAAGAAGTATGCCATACAGGTAGATGATCTTACGGTTGCCTACAACTA
TAAGCCTGTATTATGGGATATAGATCTTGCTATTCCAGAAGGTGTTCTCATGGCTATTGTAGGCCCAAATGGTGCAGGAA
AATCTACCTTAATAAAGTCTATACTCGGCATTATTAAACCTATTGCCGGCACAGTAAGAGTGTTTGGAAAAGATTATAAA
AAACAGGTAAATGAAGTCGCTTATGTACCTCAGAAAGGTAGTGTAGATTGGGATTTTCCTACAACAGCACTAGATGTTGT
AATGATGGGAACCTACGGTAGTTTGGGTTGGCTTAGAAGACCTGGCAAAAAAGAAAAGAAAGCGTCTTTAGAGGCTTTAG
AAAAAGTTGGAATGCTTGCCTTTAAGAATAGGCAAATATCTCAACTTAGCGGTGGCCAGCAACAACGTATTTTTCTAGCA
AGAGCTTTGGTTCAAAATGCAAGTATTTACCTTATGGACGAGCCTTTTCAAGGTGTAGATGCTACTACAGAAAAGGCAAT
AATCAATATTTTAAAAGAACTTAGAAAAGCTGGAAAAACCTTAATTGTAGTACATCATGATCTACAAACTGTACCAGAAT
ATTTTGATTGGGTAACATTTTTAAATGTAAAGGGCATAGCTTCTGGACCTGTTAGAGACATTTTTAATGATGACAACCTA
ACTAAAACCTACGGAATTAACTATAAGGTTTCTGTAAACGCATAG

Protein sequence : 
MIKDSNKVEVKKKYAIQVDDLTVAYNYKPVLWDIDLAIPEGVLMAIVGPNGAGKSTLIKSILGIIKPIAGTVRVFGKDYK
KQVNEVAYVPQKGSVDWDFPTTALDVVMMGTYGSLGWLRRPGKKEKKASLEALEKVGMLAFKNRQISQLSGGQQQRIFLA
RALVQNASIYLMDEPFQGVDATTEKAIINILKELRKAGKTLIVVHHDLQTVPEYFDWVTFLNVKGIASGPVRDIFNDDNL
TKTYGINYKVSVNA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ef0093 AAM75296.1 EF0093 Not tested Not named Protein 3e-42 47
EF0575 NP_814340.1 cationic ABC transporter ATP-binding protein Not tested Not named Protein 5e-42 47
sitB NP_461783.1 ATP-binding protein Virulence SPI-1 Protein 4e-47 43
sitB AAD41066.1 SitB Virulence centisome 63 pathogenicity island Protein 3e-47 43
sitB YP_217782.1 iron transporter: fur regulated Virulence SPI-1 Protein 7e-47 43
sitB NP_457256.1 Iron transport protein, ATP-binding component Virulence SPI-1 Protein 6e-46 42
sitB NP_806465.1 iron ABC transporter ATP-binding protein Virulence SPI-1 Protein 6e-46 42

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
CA2559_02040 YP_003715174.1 zinc ABC transporter ATP-binding protein BAC0400 Protein 4e-71 65
CA2559_02040 YP_003715174.1 zinc ABC transporter ATP-binding protein BAC0440 Protein 6e-46 45
CA2559_02040 YP_003715174.1 zinc ABC transporter ATP-binding protein BAC0350 Protein 2e-47 43

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
CA2559_02040 YP_003715174.1 zinc ABC transporter ATP-binding protein VFG0526 Protein 2e-47 43