Gene Information

Name : CA2559_12888 (CA2559_12888)
Accession : YP_003717319.1
Strain : Croceibacter atlanticus HTCC2559
Genome accession: NC_014230
Putative virulence/resistance : Resistance
Product : ABC transporter ATP-binding protein
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1136
EC number : -
Position : 2794816 - 2795502 bp
Length : 687 bp
Strand : +
Note : -

DNA sequence :
ATGTCCAACGTCATAGAGATTAGGAATATTATTAGAGATTTTCAATTAGGTCAAGAAACTGTTCACGTTTTAAAAGGCAT
AGACCTAGACATAAAGAAAGGTGAATATGTAGCGTTTATGGGACCATCTGGTTCTGGAAAATCTACACTTATGAATCTTT
TAGGCTGTTTAGACACTCCTACAGATGGTTCTTATACACTTAACGGAAAAGATGTAAGCCAAATGACAGATGATGAGCTT
GCAGATATAAGAAATAGAGAAATTGGCTTTGTATTTCAAACCTTTAATCTCTTACCAAGAACCACTGCTTTAGACAATGT
GGCATTGCCAATGGTTTATGCAGGCGCCACAAAATCTGAACGAAATGAACGCGCTAGTGAGGTTCTTACAGATGTAGGTT
TAGCAGACCGTATGGATCATAAGCCTAACCAACTTTCTGGAGGGCAACGTCAACGTGTTGCTGTTGGTAGAGCGTTAGTT
AACAAACCCTCTATTATACTTGCAGATGAGCCTACAGGAAACTTAGATTCTAAAACTTCTGTAGAAATCATGGCACTCTT
TGATGATATACATAAAGCTGGAAACACAGTAATCTTAGTAACTCACGAAGAAGATATTGCAGAACATGCGCATCGTGTTA
TAAGACTTCGTGACGGTATTATTGAAAGTGACACAAGAAATAGGTAA

Protein sequence :
MSNVIEIRNIIRDFQLGQETVHVLKGIDLDIKKGEYVAFMGPSGSGKSTLMNLLGCLDTPTDGSYTLNGKDVSQMTDDEL
ADIRNREIGFVFQTFNLLPRTTALDNVALPMVYAGATKSERNERASEVLTDVGLADRMDHKPNQLSGGQRQRVAVGRALV
NKPSIILADEPTGNLDSKTSVEIMALFDDIHKAGNTVILVTHEEDIAEHAHRVIRLRDGIIESDTRNR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 3e-34 43
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 9e-36 43
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 9e-36 43
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 9e-36 43
cur_1502 YP_001800896.1 cell division ATP-binding protein FtsE Not tested Not named Protein 3e-34 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
CA2559_12888 YP_003717319.1 ABC transporter ATP-binding protein NC_012469.1.7686878. Protein 5e-62 55
CA2559_12888 YP_003717319.1 ABC transporter ATP-binding protein NC_008702.1.4606598. Protein 3e-51 51
CA2559_12888 YP_003717319.1 ABC transporter ATP-binding protein CP001581.1.gene798.p Protein 2e-44 45
CA2559_12888 YP_003717319.1 ABC transporter ATP-binding protein CP001581.1.gene598.p Protein 8e-43 42