Gene Information

Name : CA2559_12348 (CA2559_12348)
Accession : YP_003717211.1
Strain : Croceibacter atlanticus HTCC2559
Genome accession: NC_014230
Putative virulence/resistance : Virulence
Product : sugar isomerase
Function : -
COG functional category : M : Cell wall/membrane/envelope biogenesis
COG ID : COG0794
EC number : -
Position : 2682099 - 2683064 bp
Length : 966 bp
Strand : +
Note : -

DNA sequence : 
TTGACACTTCAGAATAAAATTCTTTCCGTAGCAAAAGACACCATTTTAAATGAAGCTAAAGCCGTTGCTCACCTTGAGAG
CCTGCTAGATGATTCATTTTCTAATGCTGTTGAATGTATTTATAACTCAAAAGGACGTGTAATTATTACAGGTATTGGCA
AAAGTGCTATTATTGCTACTAAAATTGTTGCTACCTTAAACTCTACCGGAACTCCAGCAATCTTTATGCACGCTGCAGAT
GCCATACACGGTGATTTAGGAACTATTCTTGAAGATGATGTGGTTATCTGTATTTCAAAAAGTGGTAATACACCAGAAAT
TAAAGTCTTAGTACCATTAATTAAGAACTTTAATAATAAACTTATTGCTATTACAGGTAATAAGGATTCATTTTTAGGAC
AGCAAGCAGATTATGTTTTAAACGCATTTGTCGAAAAAGAAGCTTGCCCTAATAACCTTGCACCAACAACAAGTACAACG
GCACAATTGGTTATAGGTGATGCTTTAGCAGTTTGTCTTTTAGACCTACGTGGATTTTCAAGTAAAGACTTTGCCAAATA
TCATCCTGGTGGTGCATTGGGCAAAAAACTTTATTTACGCGTAAGTGATATTACCAAAGCAAACCAAAAACCAGAAGTAT
CTTTAACTACAGACATAAAGAAAGTAATAGTAGAGATTTCTGAAAAAATGTTAGGTGTTACTGCTGTAACTAAAGACAAC
AAAATTGTAGGTATTATTACAGACGGAGATTTAAGACGTATGCTCGCAAAAACAGATAATTTTGAAGCGCTCACTGCTCA
GGATATCATGAGTGAATCTCCAAAAACTATAGATAATGATGCTATGGCTGTTGATGCTATGGATGTTTTGGAAACCAATG
GCATCTCACAACTACTTGCCGAAGAAAACGGTACATATAGCGGCGTTGTACATTTACACAATCTTATTAGAGAAGGTATT
ATATAA

Protein sequence : 
MTLQNKILSVAKDTILNEAKAVAHLESLLDDSFSNAVECIYNSKGRVIITGIGKSAIIATKIVATLNSTGTPAIFMHAAD
AIHGDLGTILEDDVVICISKSGNTPEIKVLVPLIKNFNNKLIAITGNKDSFLGQQADYVLNAFVEKEACPNNLAPTTSTT
AQLVIGDALAVCLLDLRGFSSKDFAKYHPGGALGKKLYLRVSDITKANQKPEVSLTTDIKKVIVEISEKMLGVTAVTKDN
KIVGIITDGDLRRMLAKTDNFEALTAQDIMSESPKTIDNDAMAVDAMDVLETNGISQLLAEENGTYSGVVHLHNLIREGI
I

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
kpsF AAZ04466.1 polysialic capsule transport protein Virulence PAI I APEC-O1 Protein 2e-48 43
kpsF CAE85210.1 KpsF protein Virulence PAI V 536 Protein 1e-48 43
kpsF YP_854329.1 polysialic acid capsule synthesis protein KpsF Not tested PAI I APEC-O1 Protein 5e-48 43