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Name : CA2559_11148 (CA2559_11148) Accession : YP_003716971.1 Strain : Croceibacter atlanticus HTCC2559 Genome accession: NC_014230 Putative virulence/resistance : Virulence Product : ATP-dependent Clp protease, ATP-binding subunit ClpC Function : - COG functional category : O : Posttranslational modification, protein turnover, chaperones COG ID : COG0542 EC number : - Position : 2421982 - 2424528 bp Length : 2547 bp Strand : + Note : - DNA sequence : ATGGATGATAATTTTTCACCAAGAGTAAAAGATGTAATAGCATACAGTAAAGAAGAAGCCTTAAGGTTAGGCCACGATTT TATTGGAACTGAACATCTTATGCTTGGATTATTGAGAGATGGCGACGGAAAAGCTATCTCTATATTAGATGCACTTGATG TAGATTTAAACCATTTACGCAGAAAGGTTGAAATATTGAGCCCAGCAAATTCAAATATTGCAACGCTCTCTAATGAAAAG AAAAATCTGCATTTAACTAGACAGGCAGAACGTGCTCTTAAAACAACATTTCTTGAAGCAAAATTGTTTCAGAGCACATC TATTAACACCGCTCATCTCTTATTATGTATTTTACGTAATGAAAATGACCCTACAACAAAGCTGCTTAATAAGCTAAAAG TAGATTATGATGGCGTTAAATCCCAATTTAAAACTATGTCGACAAATGATGATGACTATATAGACCCAATTAAGGCAGAA TCTTTCTCTGATGATGATTCGGGCGATGATGAAACTAAGGACAATCCTTTTGAAAACCCTTCAGCTAAGTCTGGCAAAAA ATCTAAAACTCCGGTATTAGATAATTTTGGTAGAGATCTTACAGCTATGGCAGAAGAGAATAAACTTGATCCTGTTGTTG GAAGAGGTAAAGAAATTGAGCGTGTGTCTCAAATTTTAAGCAGACGTAAGAAAAACAACCCATTACTAATAGGTGAACCT GGTGTTGGTAAAAGTGCCATTGCAGAAGGTTTAGCATTACGTATTGTACAACGAAAAGTGTCACGCATTTTGTTTGATAA GCGCGTGGTAACTCTTGATCTTGCAAGTTTAGTTGCAGGAACTAAATACAGAGGACAGTTTGAAGAGCGTATGAAAGCCG TAATGAATGAGCTAGAAAAGAATGATGACATTATTCTTTTTATAGATGAGATTCATACCATAGTTGGTGCTGGTGGCGCA ACAGGTAGTTTAGATGCTAGTAATATGTTTAAACCTGCTTTAGCAAGAGGCGAAATACAATGTATTGGTGCTACTACTTT AGATGAGTACAGACAATATATTGAGAAAGATGGTGCTTTAGAACGCCGTTTTCAAAAAGTAATTGTAGAGCCTACTAACG TAGAGGAAACTATTGAGATACTACAGAATATTAAGAGTAAATATGAAGATCATCATAATGTAACTTATACAGATGAAGCT ATTGAGGCGTGCGTAACACTTACCAATAGATATATGACAGACCGCTTCTTACCAGACAAAGCAATTGATGCTTTAGATGA GGCTGGTTCTCGTGTACACATTACTAATATAGATGTCCCAAAACAAATTATTGAGATTGAGAAAAAGCTAGAAGAAGTAC GCGACTTAAAAAATACTGTGGTTAAAAAACAGAAGTATGAAGAAGCTGCTAAATTACGTGATGACGAAAAGAACCTAGAG AAAGAATTAGCTATAGCTCAAGAACGTTGGGAAGAAGAAAGTAAACTTCATAAAGAAGAAGTTAGTGAAGATAATGTTGC AGATGTTGTCTCTATGATGTCTGGCATACCAGTAAATAGAATTGCACAAACAGAAAGCAAGAAACTTTCAAAATTACCAG AGCAAATTAAAGGCAAAGTAATTGGACAAGATGAGGCTGTAGGAAAAGTTGTTAAAGCTATACAACGAAACCGTGCAGGA TTAAAAGATCCTAACAAACCAATTGGGTCTTTTATCTTCTTAGGACAAACTGGAGTTGGTAAAACGCAATTAGCAAAAGT ACTTGCCAAAGAATTGTTTGATAATGAACAATCGCTCATAAGAATAGATATGAGTGAGTATATGGAGAAATTTGCAATCT CGAGATTAGTTGGTGCGCCTCCAGGATATGTTGGTTATGAAGAAGGAGGACAACTTACAGAAAAAGTAAGACGTAAGCCA TACGCTGTGGTATTACTAGATGAGATTGAAAAAGCACATCCAGATGTCTTTAATATTTTATTACAAATATTAGATGATGG CTATATAACAGATAGTCTAGGACGTAAAATAGATTTTAGAAATACTATAATTATAATGACATCTAACATTGGTGCAAGAA AGTTAAAAGACTTTGGCCAAGGTGTAGGGTTTGGAACTTCTGCAAGAAAAGATCAAGAAGATGCCAATGCAAGAAGTGTT ATAGAAAATGCACTTAAGAAAGCCTTTGCACCAGAGTTTCTTAACCGTGTAGATGATGTTGTTGTCTTTAATGCATTAGA GCGTGAAGACATTCACAAGATTATAGATATTGAATTAGAGAAGTTATACTCTAGAATTGGCGGTTTAGGTTACCACTTAA CTTTAAGTGATGCTGCAAAAGATTACATCTCCGATAAAGGATTTGATAAACAATATGGAGCAAGACCATTAAAACGTGCT ATCCAGAAATATATTGAAGATGCATTAGCTGAAGAAATTATTAATTCTAGCTTGAGTGAAGGCGACAAGATTTTTATGGA TTTTGACGACGATAAAAAAGAGCTTAGCATTAAAATTGAGAAGCCGGCTGAAGAGACAGAGTCTTAA Protein sequence : MDDNFSPRVKDVIAYSKEEALRLGHDFIGTEHLMLGLLRDGDGKAISILDALDVDLNHLRRKVEILSPANSNIATLSNEK KNLHLTRQAERALKTTFLEAKLFQSTSINTAHLLLCILRNENDPTTKLLNKLKVDYDGVKSQFKTMSTNDDDYIDPIKAE SFSDDDSGDDETKDNPFENPSAKSGKKSKTPVLDNFGRDLTAMAEENKLDPVVGRGKEIERVSQILSRRKKNNPLLIGEP GVGKSAIAEGLALRIVQRKVSRILFDKRVVTLDLASLVAGTKYRGQFEERMKAVMNELEKNDDIILFIDEIHTIVGAGGA TGSLDASNMFKPALARGEIQCIGATTLDEYRQYIEKDGALERRFQKVIVEPTNVEETIEILQNIKSKYEDHHNVTYTDEA IEACVTLTNRYMTDRFLPDKAIDALDEAGSRVHITNIDVPKQIIEIEKKLEEVRDLKNTVVKKQKYEEAAKLRDDEKNLE KELAIAQERWEEESKLHKEEVSEDNVADVVSMMSGIPVNRIAQTESKKLSKLPEQIKGKVIGQDEAVGKVVKAIQRNRAG LKDPNKPIGSFIFLGQTGVGKTQLAKVLAKELFDNEQSLIRIDMSEYMEKFAISRLVGAPPGYVGYEEGGQLTEKVRRKP YAVVLLDEIEKAHPDVFNILLQILDDGYITDSLGRKIDFRNTIIIMTSNIGARKLKDFGQGVGFGTSARKDQEDANARSV IENALKKAFAPEFLNRVDDVVVFNALEREDIHKIIDIELEKLYSRIGGLGYHLTLSDAAKDYISDKGFDKQYGARPLKRA IQKYIEDALAEEIINSSLSEGDKIFMDFDDDKKELSIKIEKPAEETES |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| clpC | YP_005163377.1 | ATP-dependent Clp protease ATP-binding subunit | Not tested | Not named | Protein | 4e-177 | 46 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| CA2559_11148 | YP_003716971.1 | ATP-dependent Clp protease, ATP-binding subunit ClpC | VFG0080 | Protein | 2e-149 | 51 |
| CA2559_11148 | YP_003716971.1 | ATP-dependent Clp protease, ATP-binding subunit ClpC | VFG0079 | Protein | 0.0 | 49 |
