|
Name : CA2559_09888 (CA2559_09888) Accession : YP_003716723.1 Strain : Croceibacter atlanticus HTCC2559 Genome accession: NC_014230 Putative virulence/resistance : Virulence Product : heat shock ClpB protein Function : - COG functional category : O : Posttranslational modification, protein turnover, chaperones COG ID : COG0542 EC number : - Position : 2160329 - 2163010 bp Length : 2682 bp Strand : - Note : - DNA sequence : TTGAATATTTATGCCATTTTAGCAGTGTATTTAAATGGTATACCAATTGCTTATCTAGCTATAAAACTTAAGAAGATGAA TTTTAATAATTATACTATAAAATCACAGGAGGCCATACAGCAAGCGCAACAGCTTGCTCAGGAAATGGGCCATCAACAAA TAGAAAATGAACACATTTTTAAAGCTATAGCTACTGTAGATGAAAATGTGACTCCATTTTTATTGAAAAAACTAAATATT AATGTACCACTATTCACTCAAATTTTAGATAAAGAAATCGAAAGTTTCCCTAAAGTAAGTGGTGGCGACATTATGTTATC TAGAGAAGCAGGAAAAGCTGTAAATGAAGCTTCTAGTATCGCAAAAAAAATGAATGATGAGTATGTTTCAATAGAACATC TCATATTAGCCATTTTTAAATCTAACAGTAAAATTGCACAAATATTAAAAGATCAAGGTACTACAGAAAAAGGATTAAAA TTAGCTATTGAAGAATTGAGACAAGGCGACAGAGTAACTTCGCAAAGTGCAGAAGACACTTATAACTCTTTAAGCAAATA TGCTATCAATCTTAATGAACGTGCAGAGACTGGAAAATTAGATCCGGTTATAGGACGCGATGAAGAGATTAGACGTGTGC TGCAAATACTTTCTAGAAGAACTAAAAACAATCCTATGTTGGTTGGTGAACCTGGTGTTGGTAAAACAGCTATTGCAGAA GGCTTAGCTCATAGGATTATTGCTGGTGATATTCCAGACAACCTTAAAGACAAACAAATTTTCTCTTTAGATATGGGCGC ATTAATTGCAGGTGCCAAATTTAAAGGAGAATTTGAAGAACGCTTAAAGGCTGTTGTTAAAGAAGTAACCTCAAGTGACG GAAACATTGTTTTGTTTATAGATGAAATTCACACGCTAGTTGGTGCCGGTGGCGGCCAAGGCGCAATGGATGCGGCAAAC ATTTTAAAGCCAGCATTAGCAAGAGGAGAACTAAGAGCGATTGGTGCAACAACTTTAGACGAGTATCAAAAGTATTTTGA GAAAGACAAAGCTTTAGAACGTCGTTTTCAAAAGGTAATTGTAGATGAACCAGATACAGAAAGCGCAATTTCAATACTAA GAGGTATTAAGGAAAAGTACGAGACACACCATAAAGTAAGAATTATGGATGAAGCTATAATAGCTGCTGTGGAATTATCT GAACGCTACATTACTAGTAGATTCTTACCAGATAAAGCTATTGATTTAATGGATGAAGCTGCATCTAAACTAAGGATGGA GATTAACTCTAAACCTGAAGAGTTAGATGTTTTGGATCGTAAAGTTATGCAGCTGGAAATTGAGATTGAAGCTATTAAGC GTGAAAAAGATGAAGTTAAGTTAAAATCTTTACGATCAGATTTAGCAAACCTTAAGGAAGAACGTAATGAATTACATGCG CAGTGGAAAAATGAAAAGGATGTTGTAGACAATATACAACAGGCCAAACAAGATATTGAGCAGTTTAAGCTTGAAGCTGA ACGCGCTGAGCGAGAAGGCGATTACGGTAAAGTTGCAGAGATACGTTATGGTAAAATTAAAGAAGCTCAAGAACGCTTAG AGAAACTTCAGCAAAACGTTGAAGCTCAAAAATCTGGAAAATCTCTCATACAAGAGGAAGTTACAAGCGAAGACATTGCA GAAGTTGTTGCTAAATGGACAGGTGTTCCGGTAACCAAAATGTTACAAAGTGACCGTGAAAAGCTGTTGCGTTTAGAAGA TGAATTACACAAACGAGTAGTAGGACAACAAGAAGCTATAGTTGCTGTAAGCGACGCTGTAAGACGTAGCCGCGCAGGTT TACAAGACCAGAAAAAGCCAATAGGAAGTTTTTTATTCTTAGGTACCACTGGTGTTGGTAAAACTGAGCTTGCTAAAGCT CTAGCCGAATACCTTTTTGATGATGAAAGCGCGATGACACGTATAGATATGAGTGAGTACCAAGAACGTCACGCAGTAAG TAGACTTGTTGGTGCGCCTCCAGGATATGTGGGTTATGACGAAGGTGGACAGCTTACTGAAGCTGTTAGACGTAAGCCAT ACTCTGTTGTCCTGTTAGATGAAATTGAAAAAGCGCACCCAGATACTTTTAATATCTTATTACAGGTTTTAGATGAAGGT AGGCTTACAGATAATAAAGGTCGAATTGCAGACTTTAAAAACACCATTATCATTATGACAAGTAATATGGGAAGTGGTAT TATTGAAGAGAAGTTTAATGCGGTTAAAGATATTCCTACTGCTATTGAAGCTGCAAGAACTGAAGTTTTAGGTTTACTTA AACAAACCGTAAGGCCAGAGTTTATTAACCGTATAGACGATATCGTAATGTTTACGCCTTTAAATCAGGATAACATTAAA GAGATTGTAAGCTTGCAGTTGCGACAGGTTACTAAAATGCTAGGTAAACAGAATATTACGCTAGATGCTACTGAAGAAGC AATAAGCCTGTTAGCAAAACAAGGATTTGATCCTCAATTTGGTGCAAGACCAGTTAAGCGTACAATTCAAAAAGAGGTGC TTAACGAGTTGTCTAAACAAATCTTATCTGGAAAGGTAACTACAGATAGTATTATTCTTATAGATGCGTTTGATGATGAA CTTGTATTTAGAAACCAAAGTGATCTGGTTGAAGATCTATAA Protein sequence : MNIYAILAVYLNGIPIAYLAIKLKKMNFNNYTIKSQEAIQQAQQLAQEMGHQQIENEHIFKAIATVDENVTPFLLKKLNI NVPLFTQILDKEIESFPKVSGGDIMLSREAGKAVNEASSIAKKMNDEYVSIEHLILAIFKSNSKIAQILKDQGTTEKGLK LAIEELRQGDRVTSQSAEDTYNSLSKYAINLNERAETGKLDPVIGRDEEIRRVLQILSRRTKNNPMLVGEPGVGKTAIAE GLAHRIIAGDIPDNLKDKQIFSLDMGALIAGAKFKGEFEERLKAVVKEVTSSDGNIVLFIDEIHTLVGAGGGQGAMDAAN ILKPALARGELRAIGATTLDEYQKYFEKDKALERRFQKVIVDEPDTESAISILRGIKEKYETHHKVRIMDEAIIAAVELS ERYITSRFLPDKAIDLMDEAASKLRMEINSKPEELDVLDRKVMQLEIEIEAIKREKDEVKLKSLRSDLANLKEERNELHA QWKNEKDVVDNIQQAKQDIEQFKLEAERAEREGDYGKVAEIRYGKIKEAQERLEKLQQNVEAQKSGKSLIQEEVTSEDIA EVVAKWTGVPVTKMLQSDREKLLRLEDELHKRVVGQQEAIVAVSDAVRRSRAGLQDQKKPIGSFLFLGTTGVGKTELAKA LAEYLFDDESAMTRIDMSEYQERHAVSRLVGAPPGYVGYDEGGQLTEAVRRKPYSVVLLDEIEKAHPDTFNILLQVLDEG RLTDNKGRIADFKNTIIIMTSNMGSGIIEEKFNAVKDIPTAIEAARTEVLGLLKQTVRPEFINRIDDIVMFTPLNQDNIK EIVSLQLRQVTKMLGKQNITLDATEEAISLLAKQGFDPQFGARPVKRTIQKEVLNELSKQILSGKVTTDSIILIDAFDDE LVFRNQSDLVEDL |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| aec27 | YP_851418.1 | ATPase | Not tested | PAI II APEC-O1 | Protein | 3e-103 | 41 |
| aec27 | AAQ96721.1 | Aec27 | Not tested | AGI-1 | Protein | 2e-103 | 41 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| CA2559_09888 | YP_003716723.1 | heat shock ClpB protein | VFG2076 | Protein | 1e-124 | 44 |
| CA2559_09888 | YP_003716723.1 | heat shock ClpB protein | VFG2084 | Protein | 1e-106 | 41 |
