|
Name : CA2559_08411 (CA2559_08411) Accession : YP_003716429.1 Strain : Croceibacter atlanticus HTCC2559 Genome accession: NC_014230 Putative virulence/resistance : Unknown Product : hypothetical protein Function : - COG functional category : S : Function unknown COG ID : COG1576 EC number : - Position : 1844090 - 1844563 bp Length : 474 bp Strand : - Note : - DNA sequence : ATGAACATACAATTATATGCCATTGGCAAAACAGACCAAAAATTAATTGAAGAGCTCACAGATATATATACTAAACGATT AGGCCACTATATAAATTTTGACTTTACAATTATCCCAGATATAAAGAATACTAAAAACCTTTCTGTAGAACAACAGAAGA ACGAGGAAGGCAAACTAATTATGAAACAGTTAGAAACTTCAGATTTTGTTATTCTTCTTGATGAAAATGGTAAAGAGTTT AATTCTGTTAACTTCTCTGCTTATCTTCAAAAACGAATGAACACAGGTTTAAAACGTCTTGTTTTTATAATTGGTGGTCC TTATGGATTTTCCACGGAGGTTTATAGCAGAGCAAATAGTAAACTTTCACTTTCAAAAATGACATTTTCACATCAAATGA TTCGTGTGTTTTTTATTGAACAGTTATACCGTGCATTTACAATTTTAAGGAATGAGCCTTATCACCATCAATAG Protein sequence : MNIQLYAIGKTDQKLIEELTDIYTKRLGHYINFDFTIIPDIKNTKNLSVEQQKNEEGKLIMKQLETSDFVILLDENGKEF NSVNFSAYLQKRMNTGLKRLVFIIGGPYGFSTEVYSRANSKLSLSKMTFSHQMIRVFFIEQLYRAFTILRNEPYHHQ |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| unnamed | BAB72138.1 | open reading frame X | Not tested | Type-IVb SCCmec | Protein | 4e-26 | 43 |
| SAV0024 | NP_370548.1 | rRNA large subunit methyltransferase | Not tested | Type-II SCCmec | Protein | 5e-26 | 43 |
| unnamed | BAC67575.1 | open reading frame X | Not tested | Type-IVc SCCmec | Protein | 4e-26 | 43 |
| unnamed | BAA82243.1 | orfX | Not tested | Type-II SCCmec | Protein | 4e-26 | 43 |
| orfX | AAL26648.1 | unknown | Not tested | SCCcap1 | Protein | 3e-25 | 43 |
| unnamed | BAD24821.1 | conserved hypothetical protein orfX | Not tested | Type-V SCCmec | Protein | 4e-26 | 43 |
| orfX | BAA86653.1 | open reading frame X | Not tested | Type-I SCCmec | Protein | 4e-26 | 43 |
| unnamed | BAG06184.1 | conserved hypothetical protein orfX | Not tested | Type-VII SCCmec | Protein | 4e-26 | 43 |
| unnamed | BAB47681.1 | open reading frame X | Not tested | Type-III SCCmec | Protein | 4e-26 | 43 |
| unnamed | BAC53844.1 | open reading frame X | Not tested | SRImec-III and SCCmec-III region | Protein | 4e-26 | 43 |
| unnamed | BAC57492.1 | hypothetical protein | Not tested | Type-IIIinv SCCmec | Protein | 4e-26 | 43 |
| unnamed | BAB72121.1 | hypothetical protein | Not tested | Type-IVa SCCmec | Protein | 4e-26 | 43 |
| SAR0024 | YP_039501.1 | rRNA large subunit methyltransferase | Not tested | Type-II SCCmec | Protein | 5e-26 | 43 |
| orfXhom | BAB83497.1 | open reading frame X | Not tested | SCC 12263 | Protein | 5e-23 | 42 |
| orfX | YP_251938.1 | rRNA large subunit methyltransferase | Not tested | SCCmec | Protein | 3e-25 | 41 |
