Gene Information

Name : CA2559_06240 (CA2559_06240)
Accession : YP_003716010.1
Strain : Croceibacter atlanticus HTCC2559
Genome accession: NC_014230
Putative virulence/resistance : Virulence
Product : thiol peroxidase
Function : -
COG functional category : O : Posttranslational modification, protein turnover, chaperones
COG ID : COG2077
EC number : -
Position : 1402338 - 1402838 bp
Length : 501 bp
Strand : +
Note : -

DNA sequence : 
ATGGCCCAAGTAATATTAGGCGGAAATACTGTAAATACTTATGGAGAGCTTCCAGAGATAGGAGAAAAGGCTCCACATTT
CGAATTATTAAAATCAGACCTTTCTGTAGGAAGGTTAAAAGATTTTGAGGGAAAGAGACTTATCTTAAATATCTTTCCTA
GCATAGACACTAATACGTGTGCAACTTCTGTACGAACATTTAATGAGCGTGCTAAAAAATTAAAAAACACAGAGGTGCTT
TGTATCTCTAGAGACCTACCTTTTGCATTAAAGCGTTTTATTGATGATGAAGGTATAACAAACGTTACCAATCTTTCAGA
TTTTAGAGAACGTACAATGGGGAAAGATTATGGTCTAGAAATGATGGATGGTCCTTTTGAGGGATTACTCTCAAGAGCTG
TGATTGTATTAGATGAAAAAGGTGTAATCCTACATTCTGAACGTGTGCAAGACATTTCTAATGAGCCAGATTATGATGCC
GCATTAAATGCATTGGCATAA

Protein sequence : 
MAQVILGGNTVNTYGELPEIGEKAPHFELLKSDLSVGRLKDFEGKRLILNIFPSIDTNTCATSVRTFNERAKKLKNTEVL
CISRDLPFALKRFIDDEGITNVTNLSDFRERTMGKDYGLEMMDGPFEGLLSRAVIVLDEKGVILHSERVQDISNEPDYDA
ALNALA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
tpx YP_001216305.1 thiol peroxidase Not tested VPI-1 Protein 3e-29 44
tpx NP_230472.1 thiol peroxidase Virulence VPI-1 Protein 2e-29 44
tagD AAK20751.1 toxR-activated gene D protein Virulence VPI Protein 2e-29 44
tagD AAK20781.1 toxR-activated gene D protein Virulence VPI Protein 1e-29 44

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
CA2559_06240 YP_003716010.1 thiol peroxidase VFG0087 Protein 6e-30 44