Gene Information

Name : XNC1_0600 (XNC1_0600)
Accession : YP_003710906.1
Strain : Xenorhabdus nematophila ATCC 19061
Genome accession: NC_014228
Putative virulence/resistance : Unknown
Product : transposase
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG3415
EC number : -
Position : 511290 - 512330 bp
Length : 1041 bp
Strand : -
Note : -

DNA sequence :
ATGCCAATCATAGCACCCATACCCCGAAGTGAACGACGTCAGATGAAAAAATTTATTCATAAAACCCGGGATAAAGATTA
TGCACGCCGACTCATGGCACTCTTAATGTTACATGAAGGCAAGACCGTTTCTGCCCTCTCCAGAACCCTTCATTGTTCAC
GTTCTTCGGTTAATCGTTGGATAAATTGGTTTACATTATATGGGCTGGAAGGATTAAAAAGTTTACCGTCAGGAAGACCT
GCTATCTGGAATTTAGCGCCACTTTTTAGTTTGCTGTCGTTCTTATTACAGCACTCCCCACAGGATTTTGGCTGCCTGCG
TTCACGTTGGAGCATTGAGCTGATTACTCGAATAATCAATGAATTATTCGGTTTGTCGCTTTCGCAAAGTACGTTCTATC
GTTACTTCTGTCAGGTCGGTATTGTCTGGCGAAGAGCAGCTCCTACCGTCAAAAAGCCTGATCCTGAGTATGACGAAAAA
ATGGCAAAAATCACTGAAGCTTTATCCAGCGTGTCAGAACAACATCCTGTTTTTTACGAAGATGAAGTCGATATTGACCT
TAACCCCAAAATCGGGGCGGACTGGTGTCTGAAAGGGCAACAAAAACGGGTCATGACGCCGGGAAAAAATCAAAAACACT
ACCTCGCGGGCTGCCTTGACGCCCAAACAGGCCAAGTGACTTATGTCAGCGGTATAAAGAAAAATTCTGATTTATTTATC
AACCTGTTAAAGGAACTGAATGGCCAATATCGCCATGCAAAAAACATCACGTTGATTTTAGATAACTATGGCATTCATAA
AAGCCGGAAAGTCAGGGCATGGCTACAACAAAATCCTAAATTTAATTTGTTGTTTTTACCGGTCTATTCGCCATGGATAA
ATAAGATTGAACGCTTATGGCAATCATTGCATGAAACCGTCACACGGAATCATTGTTGTCAGTATATGTGGCAACTCTTG
AAATGCGTTGAAGCGTTTATTAACTCCTTTTCATCAGGGCAACAACCGGGAATGAGAAAAATGGGTGTATCACTATTATG
A

Protein sequence :
MPIIAPIPRSERRQMKKFIHKTRDKDYARRLMALLMLHEGKTVSALSRTLHCSRSSVNRWINWFTLYGLEGLKSLPSGRP
AIWNLAPLFSLLSFLLQHSPQDFGCLRSRWSIELITRIINELFGLSLSQSTFYRYFCQVGIVWRRAAPTVKKPDPEYDEK
MAKITEALSSVSEQHPVFYEDEVDIDLNPKIGADWCLKGQQKRVMTPGKNQKHYLAGCLDAQTGQVTYVSGIKKNSDLFI
NLLKELNGQYRHAKNITLILDNYGIHKSRKVRAWLQQNPKFNLLFLPVYSPWINKIERLWQSLHETVTRNHCCQYMWQLL
KCVEAFINSFSSGQQPGMRKMGVSLL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
api42 CAF28516.1 DNA binding protein Not tested YAPI Protein 1e-88 63
unnamed AAP70294.1 TnpA-like protein Not tested HPI Protein 2e-94 61
unnamed AAL57563.1 putative transposase Not tested LEE Protein 4e-68 57
st46 CAC81884.1 ST46 protein Not tested LEE II Protein 4e-68 57
IS630-like CAI43817.1 putative transposase Not tested LEE Protein 4e-68 57
Z4330 NP_289555.1 transposase Not tested OI-122 Protein 6e-68 57
tnpA AFL65914.1 transposase Not tested SGI1-J6 Protein 1e-88 57