Gene Information

Name : XNC1_0579 (XNC1_0579)
Accession : YP_003710885.1
Strain : Xenorhabdus nematophila ATCC 19061
Genome accession: NC_014228
Putative virulence/resistance : Unknown
Product : hypothetical protein
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG3436
EC number : -
Position : 495983 - 496330 bp
Length : 348 bp
Strand : -
Note : -

DNA sequence :
ATGAGCATATTGCCAGCAGGCACGCGTATCTGGATCGTGGCAGGGGTCACTGATATGCGCAACGGGTTCAACGGCCTGGC
CTCAAAGGTGCAAAACGCACTGAAAGATAATCCGTTCTCCGGGCAGGTCTTCATCTTCCGCGGTCGCCGGGGTGATATGC
TTAAGGTACTGTGGGCTGATGCCGATGGGTTGTGCCTGTTTACCAAACGGCTTGAGCGTGGACGCTTCGTCTGGCCGGTG
ACCCGTGAGGGTAAAGTTCATCTGACTCCCGCCCAACTGTCCATGCTGCTTGAAGGCATAAACTGGAAACACCCGCAGCG
GATGGAACGATCTGGTCTACGGATATAA

Protein sequence :
MSILPAGTRIWIVAGVTDMRNGFNGLASKVQNALKDNPFSGQVFIFRGRRGDMLKVLWADADGLCLFTKRLERGRFVWPV
TREGKVHLTPAQLSMLLEGINWKHPQRMERSGLRI

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
aec52 AAW51735.1 Aec52 Not tested AGI-3 Protein 1e-45 86
unnamed ADD91739.1 hypothetical protein Not tested PAI-I AL862 Protein 1e-45 86
pB171ORF50 CAD66190.1 ORF50 protein of pB171 Not tested PAI III 536 Protein 3e-45 85
ECO103_3553 YP_003223420.1 hypothetical protein Not tested LEE Protein 6e-44 80
Z4316 NP_289542.1 hypothetical protein Not tested OI-122 Protein 6e-44 80
l0014 CAD33776.1 L0014 protein Not tested PAI I 536 Protein 2e-28 71
unnamed ACU09438.1 IS66 family element orf2 Not tested LEE Protein 5e-37 71
ECUMN_3327 YP_002414007.1 putative transposase ORF2, IS66 family Not tested Not named Protein 2e-37 71
Z1132 NP_286667.1 hypothetical protein Not tested TAI Protein 4e-36 71
Z1571 NP_287075.1 hypothetical protein Not tested TAI Protein 4e-36 71
c3578 NP_755453.1 hypothetical protein Not tested PAI I CFT073 Protein 8e-37 71
Z4336 NP_289561.1 hypothetical protein Not tested OI-122 Protein 8e-37 71
unnamed AAC31493.1 L0014 Not tested LEE Protein 5e-37 71
Z5097 NP_290248.1 prophage-associated protein Not tested LEE Protein 8e-37 71
hp4 AAC61716.1 Hp4 Not tested PAI I CFT073 Protein 5e-37 71
ECs4546 NP_312573.1 hypothetical protein Not tested LEE Protein 8e-37 71
unnamed AAL99258.1 unknown Not tested LEE Protein 5e-37 71
c3561 NP_755436.1 hypothetical protein Not tested PAI I CFT073 Protein 2e-37 71
unnamed AAL08461.1 unknown Not tested SRL Protein 1e-36 69
Z1599 NP_287103.1 hypothetical protein Not tested TAI Protein 8e-36 67
ECO103_3567 YP_003223430.1 hypothetical protein Not tested LEE Protein 5e-35 67
Z4338 NP_289563.1 hypothetical protein Not tested OI-122 Protein 5e-35 67
Z1160 NP_286695.1 hypothetical protein Not tested TAI Protein 8e-36 67
ECUMN_3364 YP_002414037.1 putative transposase ORF2, IS66 family Not tested Not named Protein 1e-35 66
BCAM0247 YP_002232879.1 putative transposase Not tested BcenGI11 Protein 5e-30 65

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
XNC1_0579 YP_003710885.1 hypothetical protein VFG1665 Protein 1e-45 85
XNC1_0579 YP_003710885.1 hypothetical protein VFG1517 Protein 9e-29 71
XNC1_0579 YP_003710885.1 hypothetical protein VFG0792 Protein 2e-37 71
XNC1_0579 YP_003710885.1 hypothetical protein VFG1698 Protein 7e-38 71
XNC1_0579 YP_003710885.1 hypothetical protein VFG1709 Protein 2e-37 71
XNC1_0579 YP_003710885.1 hypothetical protein VFG1052 Protein 5e-37 69
XNC1_0579 YP_003710885.1 hypothetical protein VFG1737 Protein 3e-36 66