Gene Information

Name : yjcG (XNC1_0050)
Accession : YP_003710400.1
Strain : Xenorhabdus nematophila ATCC 19061
Genome accession: NC_014228
Putative virulence/resistance : Resistance
Product : transporter
Function : -
COG functional category : R : General function prediction only
COG ID : COG4147
EC number : -
Position : 53574 - 55229 bp
Length : 1656 bp
Strand : -
Note : Evidence 2b : Function of strongly homologous gene; Product type pt : transporter

DNA sequence :
ATGAAAAAAATCGTCTTGCCAACAATACCGCTATGTTTCTCTCTCCTCGCTCAAGCCGATGCCATTTCAGGCAATAATGT
AGAAAAACAACCTTTGAATATTCAGGCAATTGTCATGTTCCTGCTATTCGTCGGGTTAACACTGTGTATTACTTATTGGG
CTTCAAAACGCACTATCTCGCGTTCGGATTATTATACTGCCGGCGGGCGCATTACAGGTTTTCAAAATGGGATGGCAATT
GCCGGTGATTATATGTCAGCAGCCTCTTTCCTCGGAATTTCTGCATTAGTTTATACCTCCGGTTATGACGGGCTGATCTA
TTCGATTGGCTTCCTCGTCGGCTGGCCAATTATTCTCTTCCTCATTGCTGAACGATTAAGGAATTTAGGCCGTTATACCT
TTGCAGATGTCGCCTCTTATCGATTGAAACAAAGTCCCATCCGTACCTTATCGGCAATAGGTTCACTAGTGGTTGTTGCA
TTATATCTAATAGCCCAGATGGTAGGTGCAGGGAAACTCATTGAATTGCTGTTCGGCTTGAATTACTACATTGCCGTTGT
TCTGGTCGGTATTTTAATGGTGCTTTATGTACTGTTTGGCGGAATGCTGGCAACAACATGGGTTCAAATTATCAAAGCCA
TTCTGTTGCTGGCAGGGGCAACATTTATGGCTGTGATGGTTATGAAAGCCGTCAATTTCAATTTTAATACCCTATTTAAA
GAAGCCATTGCGGTGCATACTCTCGGCCCCGCCATCATGAGTCCTGGTGGATTAGTTTCAGATCCAATATCAGCGCTCTC
TTTAGGATTGGCGCTGATGTTTGGTACTGCCGGGCTGCCGCATATCATCATGCGGTTTTTTACCGTTAATGACGCTAAAG
AAGCACGTAAAAGTGTTTTCTATGCTACGGGTTTTATAGGTTATTTTTATATCCTGACGTTTATTATAGGGTTCGGTGCT
ATTCTATTGGTCAGCGCTAATCCCTCATTCAAAGATGCAACCGGCACATTAATCGGTGGGACTAATATGGCTGCCGTCCA
TCTCGCCAGTGCCGTTGGCGGTGATTTTTTCCTTGGATTTATCTCTGCGGTTGCTTTTGCCACTATTTTGGCTGTTGTTG
CTGGGTTAACGCTGGCAGGAGCTTCAGCGGTTTCCCACGATCTCTATGCTAATGTGATTAAAAAGGGACAAGCCAATGAA
CGAGATGAGTTAAGAGTTTCCAAAATTACTGTTGTTATTCTGGGTATTGTTGCTATCGGACTAGGTATTTTGTTTGAAAA
ACAAAACATCGCCTTTATGGTCGGTCTGGCTTTCTCTATTGCTGCAAGCTGCAATTTCCCTATTATTTTATTGTCGATGT
ATTGGCACAAGCTGACAACACGAGGAGCTTTGATTGGTGGGGGGTTAGGTTTACTCACAGCGGTTGTACTAATGATACTT
GGTCCTACGATCTGGGTCAGTATTCTTGGTCATGAAAAACCAATTTATCCTTATGAATATCCAGCTCTTTTTTCTATGTC
TGTAGCATTTATTGGAGCATGGTTATTTTCAATCACAGATACATCAATACAAGGACAGCAAGAAAGAGAAAAGTTCCGAA
GCCAGTTTATCCGTTCACAGACAGGAATTGGAATTGAACAAGGAAAAGCACATTAA

Protein sequence :
MKKIVLPTIPLCFSLLAQADAISGNNVEKQPLNIQAIVMFLLFVGLTLCITYWASKRTISRSDYYTAGGRITGFQNGMAI
AGDYMSAASFLGISALVYTSGYDGLIYSIGFLVGWPIILFLIAERLRNLGRYTFADVASYRLKQSPIRTLSAIGSLVVVA
LYLIAQMVGAGKLIELLFGLNYYIAVVLVGILMVLYVLFGGMLATTWVQIIKAILLLAGATFMAVMVMKAVNFNFNTLFK
EAIAVHTLGPAIMSPGGLVSDPISALSLGLALMFGTAGLPHIIMRFFTVNDAKEARKSVFYATGFIGYFYILTFIIGFGA
ILLVSANPSFKDATGTLIGGTNMAAVHLASAVGGDFFLGFISAVAFATILAVVAGLTLAGASAVSHDLYANVIKKGQANE
RDELRVSKITVVILGIVAIGLGILFEKQNIAFMVGLAFSIAASCNFPIILLSMYWHKLTTRGALIGGGLGLLTAVVLMIL
GPTIWVSILGHEKPIYPYEYPALFSMSVAFIGAWLFSITDTSIQGQQEREKFRSQFIRSQTGIGIEQGKAH

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AAK01502.1 putative amino acid transport protein Not tested PAGI-1 Protein 2e-129 57
cur_1523 YP_001800917.1 transporter Not tested Not named Protein 6e-71 45

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
yjcG YP_003710400.1 transporter BAC0564 Protein 0.0 81
yjcG YP_003710400.1 transporter BAC0570 Protein 5e-139 63