Gene Information

Name : XNC1_4573 (XNC1_4573)
Accession : YP_003714655.1
Strain : Xenorhabdus nematophila ATCC 19061
Genome accession: NC_014228
Putative virulence/resistance : Virulence
Product : Reverse transcriptase
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG3344
EC number : -
Position : 4374366 - 4375328 bp
Length : 963 bp
Strand : +
Note : Evidence 3 : Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Product type pe : enzyme

DNA sequence : 
ATGGCCTCGGGCAGTTATATGCCGCCAGCGGTTCGGCGTGTTGAGATACCCAAGGCGACGGGGGGAACGAGACCATTGGG
GATACCCACGGTAGCGGATCGCATCGCGCAGATGGTGGTCAAAGACAGGCTGGAGCCGATTCTGGAGCCACAATTCCACG
TTGACTCCTATGGCTACCGCCCGCACAAATCTGCGCACGATGCCCTGAGAGTAGCCCGGCAACGATGCTGGCGCACTGAC
TGGGTGCTGGACGTGGACATCAAGAGATTCTTCGATAACATCGATCATGAACTCCTGATGAGAGCGGTGCGCAGGCATAC
GGATTGCAGATGGGTGCTGCTCTACATTGAGCGATGGCTAACCGCGTCGGTGTACATGCCGGATGGAACGGTGCAGATAA
GGGACAAGGGGACGCCTCAGGGAGGGGTCGTTAGTCCGTTGCTGGCCAATCTGTTCCTGCATTATGCATTCGATATGTGG
ATGAAACGGGAATTCCCCGTCGTCCGGTTTGAGCGGTACGCTGATGATATAGTCATCCACTGCAAGAGTCATGCGCAGGC
AATGATGTTGCGTGGCAAGCTCAGAAAGCGTCTGGCTGAGTGTAAGCTGGAGATGAGTCCGGGTAAGACGAAAGTTGTCT
ACTGCAAGGACAGGGAAAGAACGGAGGCATATCCTGAAATCAGCTTCGACTTTTTGGGCTACACGTTCAGGCCAAGAAAG
TCGGTCTCGAAAGAAGGAGAGCTATTGGTGAATTTCCTGCCAGCAATGAGCACCAGAGCTGCGAAGGCAATCCGACAGAC
AGTACGGGGCTGGGATTTGAGTCACAAAACACCGCTGTCGTTGGAAGTCATGGCACGATGGCTCAACCCCATGTTACGAG
GCTGGGTTAAGTACTATGGGCGCTTTTATCGGTCAGCAATGGACTGTGTAGCCAGTCATGTAGATCTGCACCTTGCTAAA
TAG

Protein sequence : 
MASGSYMPPAVRRVEIPKATGGTRPLGIPTVADRIAQMVVKDRLEPILEPQFHVDSYGYRPHKSAHDALRVARQRCWRTD
WVLDVDIKRFFDNIDHELLMRAVRRHTDCRWVLLYIERWLTASVYMPDGTVQIRDKGTPQGGVVSPLLANLFLHYAFDMW
MKREFPVVRFERYADDIVIHCKSHAQAMMLRGKLRKRLAECKLEMSPGKTKVVYCKDRERTEAYPEISFDFLGYTFRPRK
SVSKEGELLVNFLPAMSTRAAKAIRQTVRGWDLSHKTPLSLEVMARWLNPMLRGWVKYYGRFYRSAMDCVASHVDLHLAK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed ABR13526.1 reverse transcriptase Not tested PAGI-7 Protein 3e-89 56
unnamed CAD33771.1 putative reverse transcriptase Not tested PAI I 536 Protein 5e-67 47

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
XNC1_4573 YP_003714655.1 Reverse transcriptase VFG1512 Protein 3e-67 47