Gene Information

Name : XNC1_4552 (XNC1_4552)
Accession : YP_003714636.1
Strain : Xenorhabdus nematophila ATCC 19061
Genome accession: NC_014228
Putative virulence/resistance : Virulence
Product : hypothetical protein
Function : -
COG functional category : S : Function unknown
COG ID : COG3517
EC number : -
Position : 4354813 - 4356291 bp
Length : 1479 bp
Strand : -
Note : Evidence 4 : Homologs of previously reported genes of unknown function

DNA sequence :
ATGGCTCAGCACGAAGAAAACAGCACAGCTATTGCTTCTGGCGCAACGACCTCTTTGCTTGATGAGATTATGTCCCAGGC
AAGAATGACCCCGGAAAATGACGGCTACTATATTGCTAAGCAGGGTGTTGCTGCGTTTATCGGCAGCATTCTGGATACGG
GCTCTAACGAAGAACCCATTAACAAACTGCTCGTTGATAAAATGATCGTAGAGCTGGATAAAAAGCTGAGTGAGCAGATG
GATGAAATTCTGCACGCTCAGCAATTCCAGGAACTGGAATCTTCCTGGCGTTCACTGAAGATTCTGGTGGATCGCACAGA
TTTCCGTGAAAACATTAAAATCAACGTCATTCATGCGACTAAAGATGAACTGTTGGAAGATTTTGAGTTTTCTCCTGAAA
TTATCCAGTCCGGCTTCTACAAGCACGTTTATTCCACAGGTTACGGTCAGTTCGGTGGTGAACCTGTTGCTGCCGTCATC
GGTAACTATGCGTTCAGCAACACCTCGCCAGACATTAAACTGATGCAGTATGTCAGCTCTGTTGGTGCAATGGCTCATGC
GCCATTCCTGTCTTCCGTTTCTCCGGAATTCTTTGGGGTTAACAGCTTTACTGACCTGCCAGCCATCAAGGATCTGAAGT
CTGTCTTTGAAGGCCCTTCACATACTAAATGGCGTGCGCTGCGTGAGTCTGAAGACTCACGTTACTTAGGCCTGACTGCA
CCGCGTTTCCTGCTGCGTCTGCCTTATTCCAGCGTTGAAAATCCAATCAAAAACTTCAACTATCAGGAAAATGTCAGCCG
CGACCACGATCACTTCCTGTGGGGTAACACGGCCTACCTGTTGGCAAGCTGCCTGACTGACAGCTTCGCTAAATATCGCT
GGTGCCCGAATATCATCGGTCCACAGAGCGGTGGTGCAGTAAGCGATCTGCCTGTTCACCTGTATGAAGCAATGGGCCAG
GTTCAGGCGAAGATCCCAACGGAAGTTCTGATCACTGACCGCCGTGAATTTGAATTGGCAGAAGAAGGTTTCATCACCCT
GACTATGCGTAAAGGCAGCGATAACGCCGCATTCTTCTCCGCAAACTCGGTGCAGAAACCAAAAGTATTCCCGAATACCC
GTGAAGGGAAAATTGCGGAAACCAACTATAAGTTGGGTACGCAGCTTCCGTACATGTTCATCATCAACCGTCTGGCTCAC
TACATCAAAGTGTTGCAGCGTGAACAGATCGGCTCCTGGAAAGAGCGTCAGGATCTGGAGCGTGAACTGAACATGTGGCT
GAAACAGTACATTGCTGATCAGGAAAACCCACCCACTGACGTTCGTAGTCGTCGTCCTCTGCGTGCCGCTGAAATTAAGG
TTTTGGACGTGGAAGGCGATCCAGGCTGGTATCAGGTTGCTATGCAGGTTCGCCCACACTTCAAATACATGGGTGCAAGC
TTCGAACTGTCTCTGGTCGGGCGTTTGGATAAGGAATAA

Protein sequence :
MAQHEENSTAIASGATTSLLDEIMSQARMTPENDGYYIAKQGVAAFIGSILDTGSNEEPINKLLVDKMIVELDKKLSEQM
DEILHAQQFQELESSWRSLKILVDRTDFRENIKINVIHATKDELLEDFEFSPEIIQSGFYKHVYSTGYGQFGGEPVAAVI
GNYAFSNTSPDIKLMQYVSSVGAMAHAPFLSSVSPEFFGVNSFTDLPAIKDLKSVFEGPSHTKWRALRESEDSRYLGLTA
PRFLLRLPYSSVENPIKNFNYQENVSRDHDHFLWGNTAYLLASCLTDSFAKYRWCPNIIGPQSGGAVSDLPVHLYEAMGQ
VQAKIPTEVLITDRREFELAEEGFITLTMRKGSDNAAFFSANSVQKPKVFPNTREGKIAETNYKLGTQLPYMFIINRLAH
YIKVLQREQIGSWKERQDLERELNMWLKQYIADQENPPTDVRSRRPLRAAEIKVLDVEGDPGWYQVAMQVRPHFKYMGAS
FELSLVGRLDKE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
aec18 YP_851426.1 hypothetical protein Not tested PAI II APEC-O1 Protein 0.0 72
aec18 AAQ96712.1 Aec18 Not tested AGI-1 Protein 0.0 72
HH0247 NP_859778.1 hypothetical protein Not tested HHGI1 Protein 4e-154 60

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
XNC1_4552 YP_003714636.1 hypothetical protein VFG2093 Protein 0.0 76
XNC1_4552 YP_003714636.1 hypothetical protein VFG2475 Protein 7e-164 59